Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04277 ATGGAGAAGCAGAGAAAAGAGGCTTTTGAGCTTCAGACTTTGAACGTGATACTTGCGGCAATGAACAAACTGTTGACAGAGGAAAATGATCGGCTGCAGAAAGAGGTTTCGCAGCTGGTGAATGAGAATGAATTTATGCGCCAGCAAGTGAACACTATCACAACTGATGCAAGTGTTGATGGTAGTGACATTGCTGGTTTTGTGAACAAATTGTTGACAGAGGAAAATGATCGGCTACAGAAAGAGGTTTCGCAGCTGGAGAATGAGAATGAATTTATGCGCCAACAAGTGAACATTATGAGAGCTGCTGCAAGTGCTGATGGTAGTGACATTGCTGGTTTTGGAGGCCCTTATTAG 357 0.4342 MEKQRKEAFELQTLNVILAAMNKLLTEENDRLQKEVSQLVNENEFMRQQVNTITTDASVDGSDIAGFVNKLLTEENDRLQKEVSQLENENEFMRQQVNIMRAAASADGSDIAGFGGPY 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04277 118 Coils Coil 69 103 - -
Trre11g04277 118 SUPERFAMILY Mitotic arrest deficient-like 1, Mad1 24 101 - -
Trre11g04277 118 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 2 60 IPR044830 GO:0003700
Trre11g04277 118 Coils Coil 15 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04277 Trre-Chr11 55368278 55368949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04277 68 97 Homeobox Transcription Factor Family AT5G60690 70.000 2.32e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04277 K09338 - sly:101268331 81.2629