Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04254 ATGACTCCAAGCGATGGAGGCTTTCAGGACAGATACATTGTATCCATTGATACTAAAGGGAAGAAAGGATTTAAAGAGTATTATTTTGCTTTGGTCGTTCCAATTATACTATGCTATCTGGGATCTGGTTATCTATGTGGTAGATTGTTGAAGTCTTACAGTTCATTGCCAATCAAGAAAGAAGGGCTGCAACTTCCTTCTAGTTTTGCTGCTCGTATAGCTGAGAAATCAAATCGGAATTTGAGACTTGCCGTGTCCAACACAAGGGACAATGTGGAGTTAGAGCACACACCATTGGATGCTCTCATTGCGCTGCTTTCAGCAGCAGATTATACAACTTCAGCATTCTCTGTGTAG 357 0.4118 MTPSDGGFQDRYIVSIDTKGKKGFKEYYFALVVPIILCYLGSGYLCGRLLKSYSSLPIKKEGLQLPSSFAARIAEKSNRNLRLAVSNTRDNVELEHTPLDALIALLSAADYTTSAFSV 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04254 118 Gene3D - 58 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04254 Trre-Chr11 55183162 55184421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04254 1 85 Core DNA Replication Machinery Family AT5G27740 37.594 9.26e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04254 K10756 - gmx:100807039 66.2402