Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04209 ATGTTAAAAAAAAGAAGCAAAAACCTCTCAAAAACTATTCCAAAACCCCAAATCACGAAATCAACTTCAAATCGATCAATTTCTTCACCATTTTGCTCAAAAACAACTTCAAACATCATCGACGACGAGCTGTCAAATTTCCATATTGATAGTCATGATGAAAGGTCCACCATATATTCTTTTCAGCGGGACCAAGTAACATCACAAAAGGCAATGTCATTACCATCTTCACCCCATGACTATAGAGGTCAAGCTTCTATGCGAAGCGAGCGATCAAGATATGGAGTTAATGATGAACTGGAGTCGACCTGGAATAAAGTAATTGGATCTCAAACGTTCAATAACAAACCTTTATTGCCATATGAAGCATGGAATATTGAACTCATTATTAACTGTTGGAACCCGTTTAGGGATCGAGGTTTGATGTGCATGCACCGGATTGTTCACTGTGATTTGAAAAGTGCAAATTGTCTAGTGAACAAACATTGGACCGTGAAAATCTGTGATTTGGGGCTTTCAAGAATAATGTTAGATCCTCCAATCAGAGATTCTTCGTCGGCTGGAACTCCAGAATGGATGGCCCCTGAACTCATCCAAAATGAACCATTCGATGAAAAATGTGATATCTTTAGCTTTGGTGTGATGATGTGGGAGCTGTGGACCTTGAACAGACCATGGGAAGGCGTACCTGCCGAGAGGGTAGTTTATTCTGTTGCTCATGTGGGTTCCAGATTGAGATTCCCAAAGGCCCGCTTGGCAGTCTGA 765 0.4092 MLKKRSKNLSKTIPKPQITKSTSNRSISSPFCSKTTSNIIDDELSNFHIDSHDERSTIYSFQRDQVTSQKAMSLPSSPHDYRGQASMRSERSRYGVNDELESTWNKVIGSQTFNNKPLLPYEAWNIELIINCWNPFRDRGLMCMHRIVHCDLKSANCLVNKHWTVKICDLGLSRIMLDPPIRDSSSAGTPEWMAPELIQNEPFDEKCDIFSFGVMMWELWTLNRPWEGVPAERVVYSVAHVGSRLRFPKARLAV 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04209 254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Trre11g04209 254 SUPERFAMILY Protein kinase-like (PK-like) 142 248 IPR011009 -
Trre11g04209 254 MobiDBLite consensus disorder prediction 68 90 - -
Trre11g04209 254 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 139 249 - -
Trre11g04209 254 MobiDBLite consensus disorder prediction 68 83 - -
Trre11g04209 254 MobiDBLite consensus disorder prediction 1 31 - -
Trre11g04209 254 ProSiteProfiles Protein kinase domain profile. 1 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04209 254 MobiDBLite consensus disorder prediction 11 31 - -
Trre11g04209 254 SMART serkin_6 59 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04209 254 Pfam Protein tyrosine and serine/threonine kinase 145 249 IPR001245 GO:0004672|GO:0006468
Trre11g04209 254 Gene3D Transferase(Phosphotransferase) domain 1 139 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04209 Trre-Chr11 54837964 54840622 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04209 139 253 MAP Kinase Kinase Kinase AT2G31010 73.504 2.82e-55 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Trre11g04209 PK_Tyr_Ser-Thr 6.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04209 - - vvi:100255804 199.904