Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04207 ATGTTAAAAAAAAGAAGCAAAAACCTCTCAAAAACTATTCCAAAACCCCAAATCACGAAATCAACTTCAAATCGATCAATTTCTTCACCATTTTGCTCAAAAACAACTTCAAACATCATCGACGACGAGCGGGACCAAGTAACATCACAAAAGGCAATGTCATTACCATCTTCACCCCATGACTATAGAGGTCAAGCTTCTATGCGAAGCGAGCGATCAAGATATGGAGTTAATGATGAACTGGAGTCGACCTGGAATAAAGTAATTGGATCTCAAACGTTCAATAACAAACCTTTATTGCCATATGAAGCATGGAATATTGAACTCATTATTAACTGTTGGAACCCGTTTAGGGATCGAGGTTTGATGTGCATGCACCGGATTGTTCACTGTGATTTGAAAAGTGCAAATTGTCTAGTGAACAAACATTGGACCGTGAAAATCTGTGATTTGGGGCTTTCAAGAATAATGTTAGATCCTCCAATCAGAGATTCTTCGTCGGCTGGAACTCCAGAATGGATGGCCCCTGAACTCATCCAAAATGAACCATTCGATGAAAAATGTGATATCTTTAGCTTTGGTGTGATGATGTGGGAGCTGTGGACCTTGAACAGACCATGGGAAGGCGTACCTGCCGAGAGGGTAGTTTATTCTGTTGCTCATGTGGGTTCCAGATTGAGATTCCCAAAGGCCCGCTTGGCAGTCTGA 708 0.4153 MLKKRSKNLSKTIPKPQITKSTSNRSISSPFCSKTTSNIIDDERDQVTSQKAMSLPSSPHDYRGQASMRSERSRYGVNDELESTWNKVIGSQTFNNKPLLPYEAWNIELIINCWNPFRDRGLMCMHRIVHCDLKSANCLVNKHWTVKICDLGLSRIMLDPPIRDSSSAGTPEWMAPELIQNEPFDEKCDIFSFGVMMWELWTLNRPWEGVPAERVVYSVAHVGSRLRFPKARLAV 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04207 235 SMART serkin_6 34 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04207 235 MobiDBLite consensus disorder prediction 49 64 - -
Trre11g04207 235 ProSiteProfiles Protein kinase domain profile. 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04207 235 MobiDBLite consensus disorder prediction 1 72 - -
Trre11g04207 235 SUPERFAMILY Protein kinase-like (PK-like) 122 229 IPR011009 -
Trre11g04207 235 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 120 230 - -
Trre11g04207 235 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Trre11g04207 235 Gene3D Transferase(Phosphotransferase) domain 1 120 233 - -
Trre11g04207 235 MobiDBLite consensus disorder prediction 11 37 - -
Trre11g04207 235 Pfam Protein tyrosine and serine/threonine kinase 126 230 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04207 Trre-Chr11 54837964 54840622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04207 120 234 MAP Kinase Kinase Kinase AT2G31010 73.504 1.91e-55 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Trre11g04207 PK_Tyr_Ser-Thr 5.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04207 - - vri:117926555 199.904