Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04126 ATGTGGCAGTTTCTTAATTCATTGGGGTCACTTGTTTTGGCTATGTATCCTAATTTCAATTTACGTTCTCTGCCTATTTCTCAAACTTCCGACCTTCATCTTCTATCCTCTCGATCTCCTCTCCGTCGCCGCTCAATCTCCAATCCGCCGACCACCGCTCTCACTCTCTCATATCCGCCGCACCACTGCTCTGTTAACCGTGAAAACCTAAAACCTTATCATCTCTCTGCCTCTCGCCTCCTCCAACCACCTCTTCTCTCAATTTTCTCTGCGCAGGTTTTTGGTACAGGAGAACTTGTTCTGACTTATTCTAAGATTGTTGTTAGTTACTTCAGCAAAGGTTTTTGGTTAGACTTCATTGCTGCATTGCCTCTTCCTCAGGTTTTGATTTGGATTACTATACCAACTCTTAAGGAAACAGCATGGGCAGGTGCTGCTTACAACCTCATGCTTTACATGTTAGCCAGCCATATTTTGCAAGGAGTACTAGGAAAGGTGTTAATGTGCATTCCGGGACAAATTCTGGAGTAG 531 0.4426 MWQFLNSLGSLVLAMYPNFNLRSLPISQTSDLHLLSSRSPLRRRSISNPPTTALTLSYPPHHCSVNRENLKPYHLSASRLLQPPLLSIFSAQVFGTGELVLTYSKIVVSYFSKGFWLDFIAALPLPQVLIWITIPTLKETAWAGAAYNLMLYMLASHILQGVLGKVLMCIPGQILE 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04126 176 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 90 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04126 Trre-Chr11 54132114 54134315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04126 91 159 Ion Channels AT2G28260 43.636 2.28e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04126 K05391 - mtr:25487815 110.153