Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04109 ATGTCTCTTCTCTTAATCCTCAGCATAACACTATTATTATTGTTTTCAGTTACACTTTCATCAGCATCATCATCTTCAACTGAATTTGTCTATAACAAAAACTTCAACTCAACAAACATAAACATTTATGGAAATGCAACAATTCAAAACTCAATTCTAACTCTCACAAACCAAACATTCTTTTCAATTGGTCGTGCTTTTTACCCTCAAAAACTACCTACAAAACAAAACAAAAATTCTTCAATTTTTCTTCCATTTGCAACTTCTTTCATATTTTCAATTTCACCATGCAAAAATCTCCCAGTTGCTCATGGTTTTGCTTTCATTTTCTCACCTTCAATGATCATCAATGGAGCACTATCAGGAAATTATCTTGGATTATTTAACAGATCAAGTTCAGGTGATTATTCTAACCATGTTTTTGCAGTTGAATTCGATGATTTTAGAAACGAAGAGTTTGATGAAGTTAATGATAATCATGTTGGTGTTGATTTGAATTCAATGGTTTCTATGTATTCTGAACCTGCTGAATTTTGGGGTGGAAAAAATGGTGAAAATTTAGAAAAATTGAAACTTTCTAGTGGTGAAAATTATCAAGTTTGGATTGAGTTTAGGGATTTTGAAATTAATGTTACTATGGCTCCGGCGGGGAAAAGAAAACCGAAAAAGCCTTTGATTAGTAAACCAATTAATTTTTCTAGTGTTTTCTTGGATGAAATGTATGTTGGATTTTCTGGATCAACTGGGAAAATGGTTGATACTTGTAGAATTTTGGCTTGGAGTTTTAGTCATACAAATTTTTCAATTGGTGATGCTTTGAATACTAAACATTTACCTAATTATGTGAATCCAAAGAAATTAATGTATAAATCTAAGGGTTTCATTATTTGTGTGATTTTTGGTTTAGTTTTAGTCTTAGGTTGTTGCATTTTGGTTTTATTCATTTTGTTGAGAAAAAGGAAGGAAGATGAAGAGGGAAAATTTGAAGATTGGGAATTGGAGTATTGGCCACATAAGATTAGCTATAAGGAGATTTGTGATGCAACGGGCGGATTTTGTGAAGAGAATGTGATAGGGATTGGAACAAGTGGGAAAGTATACAAAGGAGTTTTGAAAGGAGGAGAAGAAGTCGCGGTGAAGAGATTCAATCACGATACTCAACATGGAATAAGAGGCTTTTTAGCAGAGATTTCGAGCCTAGGAAGAATGAAACATCGAAACTTGTTAGGTTTCAAAGGTTGGAGTAAAGGAAAAGGAGGGAAATTGATATTGGTTTATGATTACATGGAGAATGAGAGTTTAGACAAAAGAATCTTCGAGTGTGAAGAGACCAAGTTGCTTAATTGGGAACAAAGAATAAGAGTTTTGGAAAATGTAGCTAGTGGAGTTTTATATCTACATGAAGGTTGGGAATTTGAGGTTTTGCATAGAGACATAAAAGCAAGTAATGTACTACTTGACAAAGATATGAATGCAAGAATAGGTGATTTTGGACTTGCTAGGTTGCAGCATCAAGAACTAGTAACTGACACAACAAGAGTTGTAGGGACTTTAGGGTACATGGCACCCGAATTACTCAAAGTTGGTAAACCATCAACTGCGACTGATGTTTATAGTTTTGGAATATTGATTTTAGAAGTTGTTTGTGGTAGAAGACCAATTGTAATGGATGAAGCACCATTGGTTGAATTGGTATCTTCTCTTATGGAGAAAGGTGAATTGAGTAATGCAATCGATGAACGTTTGAAGAGTCATATAGAATGTAAATATAACACCGTGGTTGCTGAGAGATTGCTTCACTTGGGTTTGTTATGTGCTAGTTTTGACCCTTGTGTTAGGCCTACAATGAGACAGGTTGTGAAAGCTTTGGAAGGTGTAAAATGCACCGAGTGTAATGAAGAGTGTGTTCATGTTAGTCTTATCGGAAAAATAAACTCAGCAGCATCTTGGTCTAAAAGTTCTACTGATTCTGCGCGTGTAAATTTTCCTACCCTTGATGACATTTTACCGTATAAATATTTTTCTGGAGATTCTTTAAGTGTGTCTTGTCTCAGCTTAGAGCCAATATCTGATTCTCTCTCAGAAGGAAGGTGA 2094 0.3457 MSLLLILSITLLLLFSVTLSSASSSSTEFVYNKNFNSTNINIYGNATIQNSILTLTNQTFFSIGRAFYPQKLPTKQNKNSSIFLPFATSFIFSISPCKNLPVAHGFAFIFSPSMIINGALSGNYLGLFNRSSSGDYSNHVFAVEFDDFRNEEFDEVNDNHVGVDLNSMVSMYSEPAEFWGGKNGENLEKLKLSSGENYQVWIEFRDFEINVTMAPAGKRKPKKPLISKPINFSSVFLDEMYVGFSGSTGKMVDTCRILAWSFSHTNFSIGDALNTKHLPNYVNPKKLMYKSKGFIICVIFGLVLVLGCCILVLFILLRKRKEDEEGKFEDWELEYWPHKISYKEICDATGGFCEENVIGIGTSGKVYKGVLKGGEEVAVKRFNHDTQHGIRGFLAEISSLGRMKHRNLLGFKGWSKGKGGKLILVYDYMENESLDKRIFECEETKLLNWEQRIRVLENVASGVLYLHEGWEFEVLHRDIKASNVLLDKDMNARIGDFGLARLQHQELVTDTTRVVGTLGYMAPELLKVGKPSTATDVYSFGILILEVVCGRRPIVMDEAPLVELVSSLMEKGELSNAIDERLKSHIECKYNTVVAERLLHLGLLCASFDPCVRPTMRQVVKALEGVKCTECNEECVHVSLIGKINSAASWSKSSTDSARVNFPTLDDILPYKYFSGDSLSVSCLSLEPISDSLSEGR 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04109 697 ProSiteProfiles Protein kinase domain profile. 352 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04109 697 Pfam Legume lectin domain 27 266 IPR001220 GO:0030246
Trre11g04109 697 Gene3D Phosphorylase Kinase; domain 1 316 428 - -
Trre11g04109 697 FunFam L-type lectin-domain containing receptor kinase V.9 25 272 - -
Trre11g04109 697 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Trre11g04109 697 PANTHER - 19 626 - -
Trre11g04109 697 CDD lectin_legume_LecRK_Arcelin_ConA 27 263 IPR001220 GO:0030246
Trre11g04109 697 FunFam L-type lectin-domain containing receptor kinase S.4 429 635 - -
Trre11g04109 697 Gene3D - 25 277 - -
Trre11g04109 697 Gene3D Transferase(Phosphotransferase) domain 1 429 642 - -
Trre11g04109 697 SUPERFAMILY Protein kinase-like (PK-like) 330 624 IPR011009 -
Trre11g04109 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Trre11g04109 697 SMART serkin_6 352 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04109 697 Pfam Protein kinase domain 354 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g04109 697 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 267 IPR013320 -
Trre11g04109 697 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 312 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04109 Trre-Chr11 53999476 54001569 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04109 25 575 Receptor kinase-like Gene Family AT4G04960 53.417 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre11g04109 Pkinase 2.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04109 - - gmx:100804025 989.949