Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04099 ATGGCTTCAGGACCATCAATTCACGGTAACTACAATTCTGAAGGCAATCATTTGGGTTCCGATGATGTTTTTTGTTCATACGATGATTATACCAACGAGGATTCTTCTTGTGCCACTCACATAGATTCTAGTAAGGATTTTCACATATCAAGGATGACAAAAACATCAACATTTCCTGCTACTGTCATTAATTCACCTGAAGTTTCTTTAAGCCAAGATGTTATTGCAACAACTGTTGAGAAGAGTATGAAAGCATGTACCGACAACCTTATGCGGTTTCTTGAGGGAATTAGTTCAAGGTTATCGCAATTGGAATTATACTGTTACAATGTTGATAAATCAATTGGAGAAATGAGATCTGAGTTAACTAGTGACCACGAGGAGGCAGATTTAAAACTCAAATCTCTTGACAAACACATGCAGGAAGTACACAGGTCACTACAAATTTTAAGAGACAAACAAGAGCTAGTTGAGACTCAGAAAGAATTAGCCAAACTTCAACTTGCTCGGAAAGGATCACCTTCCTCAAGCCACTCGCAGTCGAATGAGGAGAAATTTTCCCCTCCTGCTTCCATAGAACAGAAAAGAACTGATAATGCATCTCCTACATCATCTGATCCACATAACCAGCAGCTAGCTCTTGCCCTTTTTCATCAAGTTGCCTTCCAGCAACCGCCTATACCCCCGTCATCTCAAGCTCCACCCCCAACTGTGACCCAAACCACACAACAACCTCATTATTACATGCTGCCTGCGCCTTCACCCAACCCGCCAGCCACATCACAACTTCCTCAGAATCAGTATTTTCCTACTGATCCACAGTATCAATATCATCATCCACCAACATCGTCTCAAGTAACCCAGTCCCCGACTGTGCAACAATTTTCTCAGTATCAGCAGCCACAACAGCAATGGCTTCAACAGTTACCTCAGCAGGTACAACCTCTGCAACCACCCTCTATGCACTCTCAAATGAGACCTCCATCAGTGAATTCTTACGCTCCGTACCTTACAAGCCAAGCTTCAAGTCCACTTCCTACCGACACATTGCCGAACAGCATGCCAATGCAAAAGCCATATTCAGGGATTCCAACCCAACTCAAGGGCCATTATCCATCTCAGCCAGGTAATCCGTATGGAACTAGTGGGGTCCACGCCACACCTCCTCCTGCGAGTGCATACATGATGCATGAAGGTGAGGGTGGCAGAGCAAATTATGCTCCGCAACCTTCTCAATTTGCTCACGGTGTATATCCTCCTCAAAGTGCTTCTGCTTCCGTGCAGAATCCTGCACCGCATAATCCAACAGTCAGAAATCCTAGCCAGCCACAACTTGTCCGCAGCCATCCTTACAGTGAGTTGATTGAGAATTTGGTTAGTATGGGAGTTAGAGGCGATCTTGTGGTAAGCATTATTCAGAGGATGGAGGAAACTGGGCAGCCTGTAAATTTTAACTCTGTAGTTGAAAGGTTGAATGTACATAGTTCATTGGGTCCACAGAGGGGATGGTCAGGGTGA 1518 0.4453 MASGPSIHGNYNSEGNHLGSDDVFCSYDDYTNEDSSCATHIDSSKDFHISRMTKTSTFPATVINSPEVSLSQDVIATTVEKSMKACTDNLMRFLEGISSRLSQLELYCYNVDKSIGEMRSELTSDHEEADLKLKSLDKHMQEVHRSLQILRDKQELVETQKELAKLQLARKGSPSSSHSQSNEEKFSPPASIEQKRTDNASPTSSDPHNQQLALALFHQVAFQQPPIPPSSQAPPPTVTQTTQQPHYYMLPAPSPNPPATSQLPQNQYFPTDPQYQYHHPPTSSQVTQSPTVQQFSQYQQPQQQWLQQLPQQVQPLQPPSMHSQMRPPSVNSYAPYLTSQASSPLPTDTLPNSMPMQKPYSGIPTQLKGHYPSQPGNPYGTSGVHATPPPASAYMMHEGEGGRANYAPQPSQFAHGVYPPQSASASVQNPAPHNPTVRNPSQPQLVRSHPYSELIENLVSMGVRGDLVVSIIQRMEETGQPVNFNSVVERLNVHSSLGPQRGWSG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04099 505 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 11 505 - -
Trre11g04099 505 MobiDBLite consensus disorder prediction 367 381 - -
Trre11g04099 505 Coils Coil 149 169 - -
Trre11g04099 505 MobiDBLite consensus disorder prediction 418 445 - -
Trre11g04099 505 MobiDBLite consensus disorder prediction 247 392 - -
Trre11g04099 505 MobiDBLite consensus disorder prediction 167 208 - -
Trre11g04099 505 MobiDBLite consensus disorder prediction 170 208 - -
Trre11g04099 505 Pfam UBA-like domain (DUF1421) 451 495 IPR010820 -
Trre11g04099 505 MobiDBLite consensus disorder prediction 261 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04099 Trre-Chr11 53917146 53919635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04099 64 194 Trihelix Transcription Factor Family AT5G14540 36.641 4.86e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04099 - - aip:107610486 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04099 11 53917146 53919635 Trre11g04099 11 53917146 53919635 ECH