Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre11g04079 | ATGCCTCAACTTAAGCTACTTTTCATTCTTCTTCACACTTTAACCATAATTATATCTTGTATTTCCACTACTGAATTTGTCTATAATACAAACTTCAACTCAACAAACATTATCCTATATGGAAATGTCACCATTAACAAATCCATTCTAACTCTCCTTAATGATACTTCCACTTCCTTCTCGATAGCTCGTGCTTTTTACCCTCACAAAGTACCTACAAAACCACCAAACTCTTCCACTCTTCTCCCCTTTGCTACTTCCTTCATTTTCTCAGTTTCACCTATCAAACACTTTATCCCAGGACATGGCTTTGCCTTCATATTTACACCTTCAAGACATCTAAATGGAACAACACCGGCCGAGTATTCGACCGAGTATATTGGTTTATTCAATTTCAAGAATGATAATAAATCTAACAACCATGTTTTAGCAGTTGAATTTGATATTGTTAAAAACGAACAATTCAACGATACAAATGATAATCATGTTGGTATCGACGTAAACTCGCTTACTTCCTTAACTTCACATGAGGCTGGCTACTGGAGTGGAAAACATGACAATGAATTTAAGGTGTTGAAGATAAAAAGTGGAGAAAACTATCAGGTATGGATTGAGTTTAACCATTCTCATATAAACGTTACAATGGCTCGGGCAGGACGAAAGAGGCCTCATGTGCCTCTTATCAGTATGAATCTTAACCTTTCTGGTGTTCTTATGGATGAAACTTATGTTGGATTCAGTGCAGCCAATGGGTTGAAAAAAGATAGTGTTAAGATTCTTGCTTGGAGCTATAGTAATAAGAATTTTTCAATTGGTGATGCTTTAGTTACACACAACTTGCCTTCATTTGTCCCTCATAAAGGATGGTTTTCTGGAGAAAAAGCTATAGCTGTAGAAATAACCGGTGTTGTCTGTGTCTTAATCATTGGCTGCGCTGCGTTATTCATTCTCTATAGGGGAAATAGAGAAGAAGAGATTGAAGATTGGGAAATAGAGTATTGGCCACACAGGATTAGTTTCCAAGAGATTCATGCCGCAACCGGAGGGTTCTCTGAAGAGAATGTGGTTTTTGTAGGAAGGAACAAAAGTGTACATAAAGGGATGTTGCAAGGAGTTGAAGTCGCGGTCAAGAGAATCCCTCACCAAAGAGAAGTGATGAGAGAGTTTTTGGCCGAGGTTTCAAGCTTAGGAAGATTGAAACACAGAAATTTAGTAGGGTTTCGAGGTTGGTGCAAAGAAGACAAAGAAAACTTGATTCTAGTTTATGATTTCATGAATAATGGAAGTTTAGACAAATGGATCTTTGAGTGCGAAGAAGGAAAAATGCTAACATGGGAAGAGAGGATTAAAGTTTTGAAAAATGTAGCCGTGGGGATTCTATACATGCATGAAGATTGGGAAGTTAAGGTCTTACATAGGGACATCAAAGCAAGCAATGTTCTACTTGACAAGGACATGAATGCTAGATTGGGAGATTTTGGTTTGGCTCTTATGCATGAGCATCATGGAGAAGTGGCTAGTACAACGAAAGTACTAGGGACATTAGGATACATTGCTCCGGAAGTGATTCAAATAGGACGAGCATCGACTATGTCTGATGTGTTTGGCTTTGGAATATTGGTATTGGAAGTAATTTGCGGACGAAGACCTATTGAAGAACATAAGCCAGGGATAATCGAATGGGTGGAGTCCTTAATGGTGCTTGATCAATTGCACAATGCTGTTGATGAAAGGTTAAAAGACAAAGGAGGATACCCTATTGAGGAAGCTGAGAGATTGCTTCATTTGGGTTTGTTGTGTTCAAATTTCGACCCTAGTGTTAGACCAATAATGAGACAGGTTGTCAAAATGTTGGAGGGAGAAACGGACAACATCGAATCTGATGAAGAAAATATAGAAACAAGTTTGCTTCGAAGAATACAATCAGCTGCAATGTGGCCTAGAACCGAAAGCGGACTTCAACACAGAGATCACCCTACTTTAGAAGATATTCGATTGTTCAGTTATAAATCTAAGACGTCAACAAGCGGTTCAAGTACCATTCCGCAAGCACCACAATCGGATTCAGATATCATTGAAGAAGGCCGGTAA | 2091 | 0.3869 | MPQLKLLFILLHTLTIIISCISTTEFVYNTNFNSTNIILYGNVTINKSILTLLNDTSTSFSIARAFYPHKVPTKPPNSSTLLPFATSFIFSVSPIKHFIPGHGFAFIFTPSRHLNGTTPAEYSTEYIGLFNFKNDNKSNNHVLAVEFDIVKNEQFNDTNDNHVGIDVNSLTSLTSHEAGYWSGKHDNEFKVLKIKSGENYQVWIEFNHSHINVTMARAGRKRPHVPLISMNLNLSGVLMDETYVGFSAANGLKKDSVKILAWSYSNKNFSIGDALVTHNLPSFVPHKGWFSGEKAIAVEITGVVCVLIIGCAALFILYRGNREEEIEDWEIEYWPHRISFQEIHAATGGFSEENVVFVGRNKSVHKGMLQGVEVAVKRIPHQREVMREFLAEVSSLGRLKHRNLVGFRGWCKEDKENLILVYDFMNNGSLDKWIFECEEGKMLTWEERIKVLKNVAVGILYMHEDWEVKVLHRDIKASNVLLDKDMNARLGDFGLALMHEHHGEVASTTKVLGTLGYIAPEVIQIGRASTMSDVFGFGILVLEVICGRRPIEEHKPGIIEWVESLMVLDQLHNAVDERLKDKGGYPIEEAERLLHLGLLCSNFDPSVRPIMRQVVKMLEGETDNIESDEENIETSLLRRIQSAAMWPRTESGLQHRDHPTLEDIRLFSYKSKTSTSGSSTIPQAPQSDSDIIEEGR | 696 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre11g04079 | 696 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 470 | 482 | IPR008271 | GO:0004672|GO:0006468 | |
Trre11g04079 | 696 | ProSiteProfiles | Protein kinase domain profile. | 350 | 625 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre11g04079 | 696 | Gene3D | Transferase(Phosphotransferase) domain 1 | 425 | 642 | - | - | |
Trre11g04079 | 696 | FunFam | Putative L-type lectin-domain containing receptor kinase VII.2 | 313 | 424 | - | - | |
Trre11g04079 | 696 | Gene3D | Phosphorylase Kinase; domain 1 | 317 | 424 | - | - | |
Trre11g04079 | 696 | FunFam | L-type lectin-domain containing receptor kinase V.9 | 22 | 274 | - | - | |
Trre11g04079 | 696 | MobiDBLite | consensus disorder prediction | 672 | 687 | - | - | |
Trre11g04079 | 696 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 24 | 267 | IPR013320 | - | |
Trre11g04079 | 696 | PANTHER | - | 42 | 622 | - | - | |
Trre11g04079 | 696 | CDD | lectin_legume_LecRK_Arcelin_ConA | 24 | 265 | IPR001220 | GO:0030246 | |
Trre11g04079 | 696 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 20 | - | - | |
Trre11g04079 | 696 | Pfam | Protein kinase domain | 362 | 616 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre11g04079 | 696 | SMART | serkin_6 | 350 | 618 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre11g04079 | 696 | SUPERFAMILY | Protein kinase-like (PK-like) | 326 | 619 | IPR011009 | - | |
Trre11g04079 | 696 | Pfam | Legume lectin domain | 24 | 268 | IPR001220 | GO:0030246 | |
Trre11g04079 | 696 | Gene3D | - | 22 | 276 | - | - | |
Trre11g04079 | 696 | MobiDBLite | consensus disorder prediction | 672 | 696 | - | - | |
Trre11g04079 | 696 | FunFam | L-type lectin-domain containing receptor kinase S.4 | 425 | 631 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre11g04079 | Trre-Chr11 | 53801518 | 53803608 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre11g04079 | 21 | 566 | Receptor kinase-like Gene Family | AT4G04960 | 52.305 | 0.0 | 544 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Trre11g04079 | Pkinase | 1e-39 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre11g04079 | - | - | gmx:100804553 | 964.14 |