Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04043 ATGGCGAACGGATTGGAAAAAGAAAGTGGGTTCACAATGTTCAGTGATGATGAGTTAAAAGATGTTAATGGGGTGAAGAAAGTTGGAGAATTTGTTGAAGTAATGTGTGGTTGTACTAGTCATAGATATGGTGATGCTGTTGGAAAGCTTAAGATTTTTGTTAATGGTTATCTTGAAATCACTTGTGAATGTACACCTGGTTGTGAAGAAGACAAATTGACTCCTGCTGCGTTCGAGAAACACTCTGGACGAGAGACAGCTAGGAAATGGAAGAACAATATATGGGTAATAGTTAATGGTGAGAAGGTTCCATTGTATAAAACAGTTCTGCTCAAATACTACAACCAAGCATTAAAAACAACCAATGGATCCCATAAATCCCAAAATGGGCAGGTATGCCACCGTGACGAGTTTATCCGCTGTACTAGATGTAATAAAGAGCGTAGGTTCCGTTTAAGAACCAAAGAGGATTGTCGTCTTCACCATGATGCTTTGGCTGATCCAAATTGGAAATGTTCTGATCTTCCATATGACAAAATTACATGTGACGATGAAGAAGAAAGAGGTAGTCGCAGAGTTTACAGAGGATGCACTCGTTCTCCGGCATGCAAAGGTTGCACTTCTTGTGTCTGCTTCGGGTGTGACATATGCCGTTTTTCGGACTGCACTTGCCAGACTTGTACTGACTTTACAAGGAATGCCAATGCCAAAGCTTGA 717 0.4086 MANGLEKESGFTMFSDDELKDVNGVKKVGEFVEVMCGCTSHRYGDAVGKLKIFVNGYLEITCECTPGCEEDKLTPAAFEKHSGRETARKWKNNIWVIVNGEKVPLYKTVLLKYYNQALKTTNGSHKSQNGQVCHRDEFIRCTRCNKERRFRLRTKEDCRLHHDALADPNWKCSDLPYDKITCDDEEERGSRRVYRGCTRSPACKGCTSCVCFGCDICRFSDCTCQTCTDFTRNANAKA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04043 238 PANTHER PROTEIN ULTRAPETALA 1 10 235 IPR020533 -
Trre11g04043 238 ProSiteProfiles SAND domain profile. 17 105 IPR000770 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04043 Trre-Chr11 53509236 53511674 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Trre11g04043 SAND 0.00014 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04043 - - gmx:100796203 454.907