Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04006 ATGGAAATGATAAAATACACAGAGCGTGTTCTCATCTTCCCTTCTCACCCTCCCTTCCTCCACGACCACTCTCTCCCTCTCTCCCACCTTGACACCGACCGCAACCTCCATGTCACCTTCCGCTACCTCCGCGCTTATGTCAATGCCACCGCGGTCACTACTTCCGACCCCTTCCACGTCATCTCTTCCTCCCTCTCCCAAGCTCTCATTCACTACTACCCACTCGCCGGCACGCTTCGCCACCGCCAGGACCAAGACCGCCGCCTCGAACTCCATTGCACCCCCGGCCAAGGCATCCCTCTCATCCGCGCCACCGCCGACTTCACACTCAATTCTGTCAACTACCTCGAAGACCCGAAAGCCCCCTTCATCGAGCAGCTGGTGCCTGACCCGGGAACCGAAGAGGGGTTGGAGCACCCGTTCATGCTTCAGCTGACGTTGTTCAAGTGCGGCGGGTACACTCTTGGGGTGGCCACGCACCACGCGCTCTGCGATGGGATGGGCGGTGGGCTGTTTTTCAACACAGCGGCTGAATTGGCTCGCGGGGCAACACGGATCACGGTGGAGCCGGTGTGGGAGCGGGAGAGGTTGTTAGGTCCCAGGGTTCCTCCCCGAGTGGATTCGCCTTTGATAGAGGAATTTCTGAGTTTGGATAAGAGTGTAATACCTTATGATGAGGACATTGGTGGGGTTGTGAGAGAGTGCTTTGATGTGAGGGATGATTGCTTGGATAAGTTTAAGAAGGACTTGTTTCAACAATCTGGCTTAAACTTCACTACTTTTGAGGCTCTTGGTGCTTACATTTGGAGATCCAAGGTAAGGGCCTCAGGAGTGAAGGGTGATGAGAAGGTTAAGTTTGCATACTCAATCAATATAAGGAGACTGGTAAAGCCATCAACACCTGCTGGGTATTGGGGTAATGGTTGTGTTCCAATGTATGTGCAGCTGAGTGCTAAAGATTTGATAGAGAAACCCATTTGGGAAACAGCAAAGCTAATCAAAAAGAGTAAAAGCAATGTTACTGATGAGTATGTTCACTCCTTCATTGATTACCAGGAGCTTCATTTTGCAGATGGTATCACAGCAGGTAAAAGGATTAGTGGTTTCACAGATTGGAGACACTTAGGCCATGCTACTGTCGACTTTGGTTGGGGAGGGCCAGTTACTGTCTTGGCACTTGGAAAGAACTTGCTTGGAAGTGTTGACCCTTGCTACTTTTTGCCTTATTCAACTGCCAGTGCAGGGAAGAAAGAGGGATTCAAGGTTTTGATCACTTTGGCAGAGGCTGCTGTTCCTTCTGTTAGCAAAGATATGCTAGTTTTTGCCACTATCCAAGAACAAGTTGTTTGA 1350 0.5059 MEMIKYTERVLIFPSHPPFLHDHSLPLSHLDTDRNLHVTFRYLRAYVNATAVTTSDPFHVISSSLSQALIHYYPLAGTLRHRQDQDRRLELHCTPGQGIPLIRATADFTLNSVNYLEDPKAPFIEQLVPDPGTEEGLEHPFMLQLTLFKCGGYTLGVATHHALCDGMGGGLFFNTAAELARGATRITVEPVWERERLLGPRVPPRVDSPLIEEFLSLDKSVIPYDEDIGGVVRECFDVRDDCLDKFKKDLFQQSGLNFTTFEALGAYIWRSKVRASGVKGDEKVKFAYSINIRRLVKPSTPAGYWGNGCVPMYVQLSAKDLIEKPIWETAKLIKKSKSNVTDEYVHSFIDYQELHFADGITAGKRISGFTDWRHLGHATVDFGWGGPVTVLALGKNLLGSVDPCYFLPYSTASAGKKEGFKVLITLAEAAVPSVSKDMLVFATIQEQVV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04006 449 PANTHER ACYL TRANSFERASE 4 5 439 - -
Trre11g04006 449 Gene3D - 2 212 IPR023213 -
Trre11g04006 449 Pfam Transferase family 3 437 - -
Trre11g04006 449 Gene3D - 228 436 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04006 Trre-Chr11 53305404 53307089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04006 56 388 Monolignol Biosynthesis Gene Families AT5G48930 30.682 8.49e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04006 - - gmx:100817021 687.182