Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04005 ATGCCAGTTATTGTCACTATGATACCACCCTCAAATTTCTTTCTTTTTTCTGGTGGTCGTTGGGAGGCACAGGTGATCAAAGAGTCCATGAGGTTTTTCGTTATCGCCCCATTAATTCCAAGAGAAACATCAAATGAAGTAGAGATCGGAGGTTACGTCCTTTCGAAGGGAACTTGGGTGTGGTTTTCGTTTATAGCTGTAGCACAAGATCCTAAAAACTTTCCAGAGCCGGAGAAATTCAAACCCGAGAGGTTTGATCCCAACTGTGATGAAATGAAAAAAGGCATCCTTATGCTTTCGTACCATTTGGAATTGGTCCTCGGGCTTGCCTTGGCTTCGTCAATGGTGTCAAAGTTAGAGCCATCAAAAGAACTGATTAGAGGACCTGATAAAAACCATTTTCGCTTGATGCTTTGA 417 0.4245 MPVIVTMIPPSNFFLFSGGRWEAQVIKESMRFFVIAPLIPRETSNEVEIGGYVLSKGTWVWFSFIAVAQDPKNFPEPEKFKPERFDPNCDEMKKGILMLSYHLELVLGLALASSMVSKLEPSKELIRGPDKNHFRLML 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04005 138 Gene3D Cytochrome P450 23 103 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g04005 138 PANTHER THROMBOXANE-A SYNTHASE 24 94 - -
Trre11g04005 138 SUPERFAMILY Cytochrome P450 24 91 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g04005 138 PRINTS B-class P450 signature 69 84 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g04005 138 PRINTS B-class P450 signature 24 35 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g04005 138 PRINTS B-class P450 signature 41 68 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g04005 138 Pfam Cytochrome P450 24 88 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04005 Trre-Chr11 53297954 53303980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04005 24 93 Cytochrome P450 AT2G26170 70.000 1.66e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04005 K20771 - gmx:100805689 107.457