LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre11g04005	ATGCCAGTTATTGTCACTATGATACCACCCTCAAATTTCTTTCTTTTTTCTGGTGGTCGTTGGGAGGCACAGGTGATCAAAGAGTCCATGAGGTTTTTCGTTATCGCCCCATTAATTCCAAGAGAAACATCAAATGAAGTAGAGATCGGAGGTTACGTCCTTTCGAAGGGAACTTGGGTGTGGTTTTCGTTTATAGCTGTAGCACAAGATCCTAAAAACTTTCCAGAGCCGGAGAAATTCAAACCCGAGAGGTTTGATCCCAACTGTGATGAAATGAAAAAAGGCATCCTTATGCTTTCGTACCATTTGGAATTGGTCCTCGGGCTTGCCTTGGCTTCGTCAATGGTGTCAAAGTTAGAGCCATCAAAAGAACTGATTAGAGGACCTGATAAAAACCATTTTCGCTTGATGCTTTGA	417	0.4245	MPVIVTMIPPSNFFLFSGGRWEAQVIKESMRFFVIAPLIPRETSNEVEIGGYVLSKGTWVWFSFIAVAQDPKNFPEPEKFKPERFDPNCDEMKKGILMLSYHLELVLGLALASSMVSKLEPSKELIRGPDKNHFRLML	138

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre11g04005	138	Gene3D	Cytochrome P450	23	103	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Trre11g04005	138	PANTHER	THROMBOXANE-A SYNTHASE	24	94	-	-
	Trre11g04005	138	SUPERFAMILY	Cytochrome P450	24	91	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Trre11g04005	138	PRINTS	B-class P450 signature	69	84	IPR002397	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Trre11g04005	138	PRINTS	B-class P450 signature	24	35	IPR002397	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Trre11g04005	138	PRINTS	B-class P450 signature	41	68	IPR002397	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Trre11g04005	138	Pfam	Cytochrome P450	24	88	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre11g04005	Trre-Chr11	53297954	53303980	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre11g04005	24	93	Cytochrome P450	AT2G26170	70.000	1.66e-31	114

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre11g04005	K20771		-	gmx:100805689	107.457

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