LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre11g03971	ATGATTTTCTTATTCATCTCTCTAAGGAGCGCTTCCATTTTCTCACCACTAACCCAATTACTCTCCACCTCTACTAAGTGTAGTGCTACTTGCATTGAATTGCATATGTTGGCGAAAGCTTGTGAAAAAGGGGATGGATCTAAGTCCCTGGGTAAGATACTGGCAAAATGGAAAGAATATAATGCCCAACTTGAAGCCTGCAGTGATGCAGACAAGCCTGTTCGAAAAGTTGCAGCTAAGGGATCGAAGAAAGGGTGTATGAAAGGTAAAGGAGGGCCTGAAAACTCGCGGTGTAATTATAGAGGTGTTAGGCAGAGGACTTGGGGGAAATGGGTTGCTGAAATCCGCGAGCCTAACCGAGGAAGTAGGCTATGGCTAGGTACTTTTCCAACTGCTATTGGTGCTGCTCTTGCCTATGATGAAGCAGCCAGGGCAATGTATGGTTCTTGTGCTCGTCTCAACTTTCCTAATGTTTCGGTTCCCAGATTCTCCGAGGAATCTTCTAATGATTCTCCAGATGGAAATCATTCTGGTTCCTCAATGACAGTATTGACAAATACCGAATCCCTGATAATACCAAATAACTCGGGGATAGGAGTTGATGACGAGACTGAAATGGAATCTGTTTCCTTATCCTTAAGTGTGAAGCAGGAGAATGAGGAAGGTGAATCAGTATAA	678	0.4381	MIFLFISLRSASIFSPLTQLLSTSTKCSATCIELHMLAKACEKGDGSKSLGKILAKWKEYNAQLEACSDADKPVRKVAAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIGAALAYDEAARAMYGSCARLNFPNVSVPRFSEESSNDSPDGNHSGSSMTVLTNTESLIIPNNSGIGVDDETEMESVSLSLSVKQENEEGESV	225

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Trre11g03971	225	PRINTS	Ethylene responsive element binding protein signature	100	111	IPR001471	GO:0003700\|GO:0006355
Trre11g03971	225	PRINTS	Ethylene responsive element binding protein signature	122	138	IPR001471	GO:0003700\|GO:0006355
Trre11g03971	225	Pfam	AP2 domain	98	148	IPR001471	GO:0003700\|GO:0006355
Trre11g03971	225	Gene3D	AP2/ERF domain	99	158	IPR036955	GO:0003700\|GO:0006355
Trre11g03971	225	MobiDBLite	consensus disorder prediction	162	181	-	-
Trre11g03971	225	FunFam	Ethylene-responsive transcription factor 2	98	157	-	-
Trre11g03971	225	SMART	rav1_2	99	162	IPR001471	GO:0003700\|GO:0006355
Trre11g03971	225	ProSiteProfiles	AP2/ERF domain profile.	99	156	IPR001471	GO:0003700\|GO:0006355
Trre11g03971	225	SUPERFAMILY	DNA-binding domain	99	156	IPR016177	GO:0003677
Trre11g03971	225	CDD	AP2	98	158	IPR001471	GO:0003700\|GO:0006355

Showing 1 to 10 of 12 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre11g03971	Trre-Chr11	52965120	52968367	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre11g03971	28	159	AP2-EREBP Transcription Factor Family	AT2G40340	55.882	1.19e-49	164

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2 or ERF-ERF	Trre11g03971		AP2	2.6e-14	CL0081

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre11g03971	-		K09286	tpra:123899058	350.517

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Trre11g03971	11	52965120	52968367	Trre7g01266	7	9026682	9027269	PCT

Showing 1 to 1 of 1 entries