Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03952 ATGTCTCGACTTCAGAGTGCAAAACTTGTGTCACCGAGGCGTCCAACGAAATCCAAAGTCGATGCCCATACAACAAAGGCGCAATCATATGTAAATGACACTACAACTTTTAATTACAAGACTAAAGATTTATTGAGCCAACTTGCACACAAAGCTACTATGAATCCTAAATTGTATGCAACGGGAGAGGCAGAACTTGAGAATTCAAAGAAACTATACGGTTTAACTCAGTGCACTAGAGACCTTTCTAGTGATGATTGCAAGAATTGTCTTGATGTTGCAATTAATGAACTTCCAAATTGTTGTGATGGAAAAGAAGGAGGAAGAGTTGTTGGAGGAAGTTGCAACTTTCGATATGAGATATATCCATTTGTCAAAGAGTAA 384 0.3802 MSRLQSAKLVSPRRPTKSKVDAHTTKAQSYVNDTTTFNYKTKDLLSQLAHKATMNPKLYATGEAELENSKKLYGLTQCTRDLSSDDCKNCLDVAINELPNCCDGKEGGRVVGGSCNFRYEIYPFVKE 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03952 127 Gene3D - 18 124 IPR038408 -
Trre11g03952 127 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 30 126 - -
Trre11g03952 127 MobiDBLite consensus disorder prediction 1 25 - -
Trre11g03952 127 FunFam Cysteine-rich receptor-like protein kinase 10 20 124 - -
Trre11g03952 127 Pfam Salt stress response/antifungal 26 121 IPR002902 -
Trre11g03952 127 ProSiteProfiles Gnk2-homologous domain profile. 19 124 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03952 Trre-Chr11 52786369 52786844 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03952 31 126 Pollen Coat Proteome AT4G20670 46.602 7.04e-26 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03952 - - gmx:100527155 172.17