Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03949 ATGACTTCCTCTAATCTCTTCACAACTATTCTCATCTCATTAACCTTAGCTCTAATTACTCAAACATCTTTTGCACTCAATGACCCTCTTTTCCACATTTGTTCAAACTCCGAGAATTTCACAGCCTATAGCCCATATGAATCGAACTTGAAAACACTCATCAACTCACTTATATACAAAACCCCTTCAACCGGTTTTGGTATTGGATCAGTGGGCCTGGTCCAATCCCAAAACCAACAAGCATATGGGCTTGCTCTTTGTCGCGGTGATGTGTCAACCTCAGAATGCAAAACTTGTGTCTCTGATGCAACCAAAGAAATCCAAAGTCGTTGCCCATACAATAAAGGCGCGATCATATGGTACGATAATTGCATGTTCAAGTACTTGGGCAATGATTTCATTGGCAAAATTGATAATACAAACAAGTTCTCTTTATTGAATGTACAAAGTGTTAATGATCCTATCAAATTCAACAACATGACTAAGGACTTATTGAGCTTACTTGCTAATGAAGCTTCTATGGATAAAAAATTGTATGCTAGTGGAGATTTGAAGATTGGAAAATCAGAGAGAATTTATGGGCTAGCTCAATGCACTAGAGACCTTTCTAGTCTTGATTGCAAGAAATGTCTTGATGATGCCATTAGTGAACTTCCAAATTGTTGTGATGGAAAAAAAGGAGGAAGAATTGTTAGTGGAAGTTGCAACATTCAATATGAAGTTTACTCATTTGTTAAGGAGTAA 744 0.371 MTSSNLFTTILISLTLALITQTSFALNDPLFHICSNSENFTAYSPYESNLKTLINSLIYKTPSTGFGIGSVGLVQSQNQQAYGLALCRGDVSTSECKTCVSDATKEIQSRCPYNKGAIIWYDNCMFKYLGNDFIGKIDNTNKFSLLNVQSVNDPIKFNNMTKDLLSLLANEASMDKKLYASGDLKIGKSERIYGLAQCTRDLSSLDCKKCLDDAISELPNCCDGKKGGRIVSGSCNIQYEVYSFVKE 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03949 247 Gene3D - 139 244 IPR038408 -
Trre11g03949 247 Gene3D - 27 133 IPR038408 -
Trre11g03949 247 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Trre11g03949 247 Pfam Salt stress response/antifungal 152 241 IPR002902 -
Trre11g03949 247 Pfam Salt stress response/antifungal 34 128 IPR002902 -
Trre11g03949 247 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Trre11g03949 247 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 10 246 - -
Trre11g03949 247 FunFam Cysteine-rich receptor-like protein kinase 25 141 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03949 Trre-Chr11 52779092 52779835 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03949 3 246 Pollen Coat Proteome AT4G20670 35.547 1.28e-45 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03949 - - gmx:100527155 366.311