Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03947 ATGGCTTCCTCAAACCTTATTCTCTTCTCAATTACCTTTGCTGTCCTTATGCAAACATCTTTTGGAACCGACTCACTTTCCCATTTTTGTTCAAACGTGGGTAACTTCACTGCCCATAGCCCATATGAATCAAACTTGAAAACACTTATGAACTCACTTATCAATAAGACACCTTCAACGGGTTTCAGCATTGGATCAGTGGGACTAGCCAAATTGAAAAACCAAAAAGCATATGGGCTAGCTCTTTGTCGTGGCGATGTATCAACCTTAGAATGTAAAACTTGCGTTTCACAAGCAAGTCAAGAAGTTCTCGATCTTTGTCCGTATAATAAGGGTGCTGTTGTATGGTACGACAATTGCATGTTCAAGTACTTGAACATTGATTTCTTTGGCAAAATTGATAATAAAAACAAGTTCTCATTATTAAATGTACAAAATGTTGATGGTCCTATCAAATTCAACAACATGACTAAGGACTTATTGAGCTTACTTGCTTATGAAGCTTCTATGGATCATAAATTTTATGCTAATGGAGAATTGAAGATTGGAGAATCAGAGAGAGTTCATGGGTTAGCTCAATGCACTAGAGACCTTTCTAGTGTTGATTGTAAGAAATGTCTTGATGATGCAATTAGTGAACTAATACCAAATGGAAAAAAAGGAGGCAGAGTTGTTGGTGGAAGTTGTAACATTCGATATGAAATTTACTCATTTGTTAAGGAGTAA 726 0.3623 MASSNLILFSITFAVLMQTSFGTDSLSHFCSNVGNFTAHSPYESNLKTLMNSLINKTPSTGFSIGSVGLAKLKNQKAYGLALCRGDVSTLECKTCVSQASQEVLDLCPYNKGAVVWYDNCMFKYLNIDFFGKIDNKNKFSLLNVQNVDGPIKFNNMTKDLLSLLAYEASMDHKFYANGELKIGESERVHGLAQCTRDLSSVDCKKCLDDAISELIPNGKKGGRVVGGSCNIRYEIYSFVKE 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03947 241 ProSiteProfiles Gnk2-homologous domain profile. 24 129 IPR002902 -
Trre11g03947 241 Gene3D - 135 238 IPR038408 -
Trre11g03947 241 Gene3D - 22 129 IPR038408 -
Trre11g03947 241 ProSiteProfiles Gnk2-homologous domain profile. 135 238 IPR002902 -
Trre11g03947 241 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 6 240 - -
Trre11g03947 241 Pfam Salt stress response/antifungal 150 235 IPR002902 -
Trre11g03947 241 Pfam Salt stress response/antifungal 30 124 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03947 Trre-Chr11 52771267 52771992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03947 26 240 Pollen Coat Proteome AT4G20670 36.726 7.42e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03947 - - gmx:100527155 329.331