Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03889 ATGTCACTCCCACCACCGATCCCACCACCTTCACTTTCAACTCCACCAAAGGTAAGGCCAACGGAGCTACCAATCCGGCAAATTCCAGGAACTCATGGATGGCCAATACTAGGTCCCTTGTCTGATAGATTAGACTATTTCTGGTTTCAGAAACCAGAAAACTTCTTCAGAACACGAAAGGAAAAATACAAAAGTACAGTGTTCCGTACCAATATTCCTCCTACGTTTCCTTTCTTCACAAACGTTAATCCTAACATCATTGCTGTTCTTGATTGTAAATCTTTCTCTCACCTTTTCGACATGGATCTTGTTGATAAAAAGGATATTCTTGTTGGAGATTTTGTTCCTAGTGTGCAATTCACCGGGAATATTAGAGTTGGTGTTTACCAAGATGTTTCTGAACCTCAGCATGCTAAGGCTAAGAATTTCGCCATGAACATATTGAAACAAAGCTCAAGCATATGGGTACCAGAACTTATAGCAAACCTCGACATATTTTTCGACCAAATTGAAGCAACATTGTCTAAATCTTCATCAGCCGGTTACTTTTCCCCACTGCAGCAATTTCTGTTCACTTTCCTAAGCAAAGTTCTTGCCAGAGCTGATCCTTCCCTTGACCTGAAAATCGCGGAATCAGGCTCTTCCATGCTTAACAAATGGCTCGCGGTTCAGCTTCTACCAACTATTAGTATTGGCACCATTCAACCGCTCGAAGAAATCTTCCTTCATTCGTTTTCTTACCCCTATGCTCTTGTCAGTGGAGATTACAACAACCTCTACAACTTCATCAAACAACATGGTAAGGAAGTGATAAAAAGTGGAATAGAGTTCGGGTTGAGTGAAGATGAAGCAATCCACAACTTGCTTTTCGTGTTGGGTTTCAATTCATATGGCGGGTTTTCAATTTTCCTTCCTAATTTGATAAACACCATAGCGAATGACCCAACCGGTTTGCAAGAACAACTAAGGAAGGAAGCGAGAGAGAAAGGCGGTTCAACTCTCGGGTTCAGTTCGTTGAAAGAAATGGAACTAATTAATTCAGTGGTTTACGAAACCCTTCGGTTGAACCCACCGGTTCCGCTTCAGTTCGGTCGAGCCAGAAAGGATTTTCAATTAAGTACATATGACTCGGCGTTCAACGTGAAGAAGGGTGAGTTATTATGTGGGTATCAAAAGCTTGTAATGAGGGATCCGGCTGTGTTTGATGAACCGGATAAATTTATACCGGACCGGTTCACTAAAGAGAAAGGGGCCGAGTTGTTGAACTATTTGTATTGGTCTAATGGGCCACAAAACGGTTCGCCAAGTGTGTCCAACAAGCAGTGTGCGGGCAAGGACATTGTGACCTACACCGCGGCCTTGATTGTGGCACACTTGCTTCGTAGGTACGATTTAATTAAAGGGGATGGCGGTTCCATCATTGCCTTAGAGAAGGCCAAATGA 1443 0.429 MSLPPPIPPPSLSTPPKVRPTELPIRQIPGTHGWPILGPLSDRLDYFWFQKPENFFRTRKEKYKSTVFRTNIPPTFPFFTNVNPNIIAVLDCKSFSHLFDMDLVDKKDILVGDFVPSVQFTGNIRVGVYQDVSEPQHAKAKNFAMNILKQSSSIWVPELIANLDIFFDQIEATLSKSSSAGYFSPLQQFLFTFLSKVLARADPSLDLKIAESGSSMLNKWLAVQLLPTISIGTIQPLEEIFLHSFSYPYALVSGDYNNLYNFIKQHGKEVIKSGIEFGLSEDEAIHNLLFVLGFNSYGGFSIFLPNLINTIANDPTGLQEQLRKEAREKGGSTLGFSSLKEMELINSVVYETLRLNPPVPLQFGRARKDFQLSTYDSAFNVKKGELLCGYQKLVMRDPAVFDEPDKFIPDRFTKEKGAELLNYLYWSNGPQNGSPSVSNKQCAGKDIVTYTAALIVAHLLRRYDLIKGDGGSIIALEKAK 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03889 480 FunFam Allene oxide synthase, chloroplastic 23 479 - -
Trre11g03889 480 PANTHER CYTOCHROME P450 26 23 463 - -
Trre11g03889 480 SUPERFAMILY Cytochrome P450 24 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g03889 480 PRINTS E-class P450 group IV signature 442 460 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g03889 480 PRINTS E-class P450 group IV signature 342 358 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g03889 480 PRINTS E-class P450 group IV signature 379 393 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g03889 480 PRINTS E-class P450 group IV signature 395 413 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g03889 480 Pfam Cytochrome P450 310 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g03889 480 CDD CYP74 57 472 - -
Trre11g03889 480 Gene3D Cytochrome P450 23 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03889 Trre-Chr11 52130660 52141087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03889 101 480 Cytochrome P450 AT4G15440 59.896 5.96e-168 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03889 K10528 - gmx:100784395 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03889 11 52130660 52141087 Trre11g03889 11 52130660 52141087 ECH