Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03874 ATGGATCCCTTGATCCGCAAGCTCCGCCGCCACCTTCTCCAATGGCTTCACCGATCTCGTTCCGGATCGGTGTTTTTTGTGAGGAGAATTTCGTATAAAGAAGTTAGAAAAGCAACTGATAGTTTTCAAAGAATTGTTTACAGCAATTCTGAAGTTTCTGCATATGCTGCGAATTTTGGTGATGGTGGTGTTTGTTTAGTGAAAGAAGTTAAAGAATTTGATAAAGGAAATGATGAGAATTTTCATAAACAAGTGCAGTTGTTAGGACGTTTGCATCATCGCCACCTTCTTTCACTCAAAGGCTTTTCTCTGGGACACAATCGCAAGAGCAAAAGATTACTTATATTTGACAACATAGAAAATGGAAGCTTAAAGGAACATCTCAATGATCCCTTGAAGACTCCCTTAAATTGGAGGACAAGGTTGCAGATTGCTAATGGTGTCGTGGCTGCACTGGAGTATTTGTTTCTTTTCAGTGAGCCACCAATAAGTCATGTCTCTATCAGCTCTAGCAATATTATGTTAGATGAGAACTTCACCCCAAAACTATCTGATTTTGGCCTTCTCACTGGTGGAAGTTCTGTCTCAAGACCACCATACTCTCAAGATAGCATGGGACAGGAAAGTTGCAAGATTATATTCCAACTTGGAGTTCTCATACTGGAACTAGTCACCGGTCAGTCTTCAGAGATGGAAGGTTCCGATTTAATTGAATGGATTCAAGAATCCCGATTTTTCAGTTCAATAGATAAGATGTTAGACCCTGATCTTGGAAACAATTATGACTGTACGGAGCTTAAAAGTCTTCTAGCTGTGGCAAAATTATGTATCAAATCATGGGACAAGCCTTCGTATACAATTCCTCAGTTATTTCGGTATCTCCAAAAGGAGACTGATATTCCCCAAGATTAG 912 0.398 MDPLIRKLRRHLLQWLHRSRSGSVFFVRRISYKEVRKATDSFQRIVYSNSEVSAYAANFGDGGVCLVKEVKEFDKGNDENFHKQVQLLGRLHHRHLLSLKGFSLGHNRKSKRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLQIANGVVAALEYLFLFSEPPISHVSISSSNIMLDENFTPKLSDFGLLTGGSSVSRPPYSQDSMGQESCKIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFFSSIDKMLDPDLGNNYDCTELKSLLAVAKLCIKSWDKPSYTIPQLFRYLQKETDIPQD 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03874 303 Pfam Protein tyrosine and serine/threonine kinase 65 190 IPR001245 GO:0004672|GO:0006468
Trre11g03874 303 FunFam Protein kinase superfamily protein 119 209 - -
Trre11g03874 303 SUPERFAMILY Protein kinase-like (PK-like) 23 266 IPR011009 -
Trre11g03874 303 PANTHER OS01G0253100 PROTEIN 27 297 - -
Trre11g03874 303 FunFam Protein kinase superfamily protein 16 117 - -
Trre11g03874 303 FunFam probable receptor-like protein kinase At1g49730 213 302 - -
Trre11g03874 303 Gene3D Phosphorylase Kinase; domain 1 17 117 - -
Trre11g03874 303 Gene3D Transferase(Phosphotransferase) domain 1 119 301 - -
Trre11g03874 303 ProSiteProfiles Protein kinase domain profile. 10 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03874 Trre-Chr11 51996780 51998897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03874 22 299 Receptor kinase-like Gene Family AT3G19300 35.786 6.98e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Trre11g03874 PK_Tyr_Ser-Thr 4.8e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03874 - - aprc:113853565 481.1