Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03862 ATGGGTTTTTTGTTGAAAGAAGTTTTGAAGACTTTGTGTGGTAGGAATCAATGGTCTTATGCTGTGTTTTGGAAGATTGGTTGCAACAATTCTAAGTTATTAATATGGGAAGACTGCTATTATGAACCTTTGTCATGTCCTTCCCCTAATGGCATTGTTGGGATGTCAAATTTTTCTAATCCGAACGGGGAAGGATGCTGGTTTTCATCTGAGTCTCAATCGTCTAATCTAGGAATACAAGAGGAGGATAGAGTCTCTTCTTTGATTAACAAAATGACAGTCAATAATTTAGTCATTGTTGCAGGTGAAGGTATAATTGGACGCGCTGCATTTACCAATAGTCATGAATGGATTCTCTTGAACAATTTTGCTAATGGTGCATATCCACCTGAGGTATATGCTGAAATGCATCACCAATTTTTAGCTGGAATGCAGACAGTAGCAGTAATTCCTGTGCTTCCTCACGGGGTTATTCAACTTGGTTCTTTCTTTCCGATAATGGAGAATATGGGATTTGTGCATGAAGTAAAGAGCCTGATCTTGCAACTAGGGTGTATTCCCAATGCCCTTCTATCCGAGGACTATTCAGCTAAACTTTCAAATGGAAGACTTGACGGACTTGCTACTTCCGGTGTGCCCGTTTCTGCTGATACATCAGTCATTACCTCAAATTCCACTCATTCAGTGGTTAATGGCTCCAACCAGCAAAGTTATTCATTTCATGCTTCAAACCCTATTGTTCAAAGACAGGGTAGAGTTGTGGAGGCTAAAGTAATACCCTCAAATTTTGATTCAAATCTGCAAAAGCATTCTGTTTCATATAACGGGAGATCTGAATTCAATAACTTTGCTGGTTCTGAGCCGTTTGGTCTATCAGGTCCAAGTGATCATAGCCTAAAATATATGGAACAACAAATCTTATCAGCAGTTGAGAGTCGAGATAATTTTAATCCTTGTATTAATGTGTCAAGTTCCTTAAACATTTCTCAACTAAAAACAGATGGAAGCCATAACGTTGGCCGTGGCAGTACTTCATTACTTAGAGGAATCCCAGTAAACGGTGGGATGAATCTGATTACTAGTTCAGAATCACTGAATGATAGTTCGAATTTGACTGGTCGATCAGGTGTCATCCACATGCCTCTAGAATGTTCTGATCAGAAGATTCTTCCCGAAGTTTCAAACTTTGCTTCAAGAGGTCAAAAGATAGCCTATGACATGCTTCAGGCTTCTAACAGCTCTTTTAATCCGGAGGAGCATGTGCCTATTAGTAGTCATATCCCTAGTTTTGCCGATGATTTCTTTCAGAAAGATGGTACTAATCAACCTAAGATGACAACGAATCCTAAACACGGAGAAGCTTGTGCTCAACAATCTCCATCAGGTGGTGACGACCTGTTTGATATTTTAGGTGTGGATTTTAAAAACAAACTTCTCAAAGGACACTGGAATGAACTGTTTGCTGATGAATCAGATGCCAGTGTTGAAAATGTGGATAAAAAGGAAATATGTACGAACAAAGAGGGTACAAATTCTGATTATTATTCAGCTAACAAATCAATGTTGGACAGTAGCATTTTTTCTGGCATGTCAACAGACCACCTCTTGGATGCTGTGGTCTCAAAGGCCAAACGTCCTTTGGTACATAATTCCGATGACATGTCTTGCAAGACAACATTGACCGGGAATAGTAGTGTCACCTCTATTCCCTCTCGTGTTTGCAAGCAGGTTATGTCCGGTAATTTTGAAGGAGATTTGTTTGGTTTTTCGAAGAATGGAGGTAAAACTGTTGCCTTAGAAACTAGTTCTCCAAGGTCTGGTTGTAGCAAGGATGATACCGGAAACCTTTCTCAAACGACTACTATATGTGGTTCTCAACTTAGCTCATGGTTGGAGAATGGTGGCAATGTGAAGCATGAAAAGCGTGAAAATAGTGTTTCAACTGGATACTCTAAGCGGCCAGATGAACCTTGCAAACCTAATCGGAAAAGGCTTAAACCAGGAGAAAATCCCAGGCCTAGACCTAAAGATCGTCAAATGATTCAAGATCGTGTCAAAGAGTTACGAGAGATTGTTCCAAATGGAGCGAAGTGTAGCATAGATGCACTGCTGGAACGGACTATTAAGCATATGGCTTTCTTGCAAAGTGTGACAAAGCACGCCGACAAGCTGAAACAGACCGGAGATTCTAAGATCGTTTGTAACGAAGGTGGGCTGCTTTTGAAAGACAATTTTGTGGGAGGGGCTACATGGGCATATGAGGTTGGCTCCCAATCAATGGTTTGTCCGATTAGAGTCGAAGATTTGAATCCTCCTCGTCAGATGCTAGTCGAGATGCTTTGCGAGGAACGGGGTTTCTTTCTAGAAATAGCTGACTTAATCAGAGGATTAGGCTTAACAATCTTGAAGGGCGTAATGGAAGCTCGCAACGACAAAATCTGGGCGCATTTTGTTGTTGAGGCAAACAGGGACGTAACGAGAATGGAAATATTTATGTCACTCGTTCGTCTTCTAGAGCAAACGATGAAGGGTAATGCGTCTTCATCGAATGCAATTGATGACATGATCGGTTACAACACTTCACCACAGAAGGCCTAA 2598 0.4092 MGFLLKEVLKTLCGRNQWSYAVFWKIGCNNSKLLIWEDCYYEPLSCPSPNGIVGMSNFSNPNGEGCWFSSESQSSNLGIQEEDRVSSLINKMTVNNLVIVAGEGIIGRAAFTNSHEWILLNNFANGAYPPEVYAEMHHQFLAGMQTVAVIPVLPHGVIQLGSFFPIMENMGFVHEVKSLILQLGCIPNALLSEDYSAKLSNGRLDGLATSGVPVSADTSVITSNSTHSVVNGSNQQSYSFHASNPIVQRQGRVVEAKVIPSNFDSNLQKHSVSYNGRSEFNNFAGSEPFGLSGPSDHSLKYMEQQILSAVESRDNFNPCINVSSSLNISQLKTDGSHNVGRGSTSLLRGIPVNGGMNLITSSESLNDSSNLTGRSGVIHMPLECSDQKILPEVSNFASRGQKIAYDMLQASNSSFNPEEHVPISSHIPSFADDFFQKDGTNQPKMTTNPKHGEACAQQSPSGGDDLFDILGVDFKNKLLKGHWNELFADESDASVENVDKKEICTNKEGTNSDYYSANKSMLDSSIFSGMSTDHLLDAVVSKAKRPLVHNSDDMSCKTTLTGNSSVTSIPSRVCKQVMSGNFEGDLFGFSKNGGKTVALETSSPRSGCSKDDTGNLSQTTTICGSQLSSWLENGGNVKHEKRENSVSTGYSKRPDEPCKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMAFLQSVTKHADKLKQTGDSKIVCNEGGLLLKDNFVGGATWAYEVGSQSMVCPIRVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWAHFVVEANRDVTRMEIFMSLVRLLEQTMKGNASSSNAIDDMIGYNTSPQKA 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03862 865 MobiDBLite consensus disorder prediction 635 680 - -
Trre11g03862 865 MobiDBLite consensus disorder prediction 633 680 - -
Trre11g03862 865 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 854 IPR043561 GO:0003700|GO:0006355
Trre11g03862 865 CDD bHLH_AtLHW_like 669 738 - -
Trre11g03862 865 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 665 714 IPR011598 GO:0046983
Trre11g03862 865 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 179 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03862 Trre-Chr11 51808818 51814538 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03862 462 853 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.778 2.15e-110 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03862 - - cam:101492357 1168.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03862 11 51808818 51814538 Trre11g03862 11 51808818 51814538 ECH
Trre11g03862 11 51808818 51814538 Trre7g01385 7 10220526 10225522 PCT