Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03791 ATGGCAAGTCAAAGAATTGGAGAGCTTGATTTTTCTGAGGCAGAACATTATGGAATTCATCATAGGATTAACAATCCTTCTTCAAGCTTAATGAATGAAGGATCTGGTTTTGATTTTGGGGAGCTAGAAGAAGCAATAGTTCTGCAAGGAATTAAGAGTAGAAATGATGAAACAAAAGCATCTTTTTTCACAGCCAAACCTGCTTCTGCTACACTGGAAATGTTCCCTTCTTGGCCAATGAGATTCCACCAATCCTCAACAGGAGGGAATAAATCAGGAGGGGAAAGCAGTGATTCAGCACTATCAAGCAAAAATGAGAATCCATTTGAATCAGAATCATCACCATTAAGTTGTAAAAAAGCATCTTCTTCATTTTCATCAGAACAAAACAATACTAATAATCAGCAGCTACAGCAACAACAGAATATGATAACAAATGATGCTATAAGAACAGGCTCTTCATCACAGAATCAATCAGTAGCAAAAGAAAAGAAAAAGGGAGGTGGTTCAACATCAGATAAGCCACTTGATGCAAAGACATTGAGGCGTTTGGCACAAAACAGAGAAGCTGCAAGAAAAAGTCGTCTAAGGAAAAAGGCTTATGTGCAACAACTAGAGTCAAGTAGATTAAAGCTTGCACAATTGGAACAAGACCTTCAAAGAGCACGCTCTCAGGGTATGTTCATGGATTGGAATGGTGGTGTTGGAGGCAATATAAGTTCTGGAGGTGCAATGTTTGACATGGAATATGCAAGATGGTTAGAAGATGACAACCGTTTATTAACGGAGTTAAGAAACGGATTACAAGCGGCGTTATCAGATAATGAAATGAGAGTAATGGTGGATGGGTATTTATGTCATTATGATCAAATATTTAGAGTGAAGAGTGTCACCGCTAAATCAGACGTGTTTCATCTTATCAATGGCATGTGGACTTCTCAAGCTGAACGTTGTTTCCTTTGGATTGGTGGTTTTAGACCCTCAGAAATTATCATGATGTTAATCCAACAATTAGAGCCACTAGCTGAACAGCAAATAATGGGAATGTATGGATTAAGGCATTCATCACAGCAAGCAGAAGAAGCACTCTCTCAAGGACTTGACCAATTGCAACAATCTCTTGTTGATACCATTGCTGGAGGACCCCTTGTTGATGGTGTTCAACAAATGGTTGTTGCCATGGGTAAACTTTCTAATCTTGAAGGATTTCTTCGCCAGGCTGATAATTTGAGGCAACAAACTCTTCACCAATTGTGTCGATTACTCACACTTCGTCAAGCAGCACGCTCTTTTCTTGTCATTGGAGAGTACTATGGGCGACTTCGAGCCCTTAGTTCTCTGTGGTCATCAAGACCACGAGAGAACATGATGAGTGATGATAACTCATGCCAAACAACTACAGACATGCAAATGGTTCAACCTTCTCAGAATCATTTCTCCAATTTCTGA 1449 0.3954 MASQRIGELDFSEAEHYGIHHRINNPSSSLMNEGSGFDFGELEEAIVLQGIKSRNDETKASFFTAKPASATLEMFPSWPMRFHQSSTGGNKSGGESSDSALSSKNENPFESESSPLSCKKASSSFSSEQNNTNNQQLQQQQNMITNDAIRTGSSSQNQSVAKEKKKGGGSTSDKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLAQLEQDLQRARSQGMFMDWNGGVGGNISSGGAMFDMEYARWLEDDNRLLTELRNGLQAALSDNEMRVMVDGYLCHYDQIFRVKSVTAKSDVFHLINGMWTSQAERCFLWIGGFRPSEIIMMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLDQLQQSLVDTIAGGPLVDGVQQMVVAMGKLSNLEGFLRQADNLRQQTLHQLCRLLTLRQAARSFLVIGEYYGRLRALSSLWSSRPRENMMSDDNSCQTTTDMQMVQPSQNHFSNF 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03791 482 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 182 197 IPR004827 GO:0003700|GO:0006355
Trre11g03791 482 FunFam BZIP family transcription factor 178 227 - -
Trre11g03791 482 Coils Coil 198 225 - -
Trre11g03791 482 MobiDBLite consensus disorder prediction 80 181 - -
Trre11g03791 482 SMART brlzneu 175 241 IPR004827 GO:0003700|GO:0006355
Trre11g03791 482 CDD bZIP_HBP1b-like 179 229 - -
Trre11g03791 482 ProSiteProfiles DOG1 domain profile. 243 451 IPR025422 GO:0006351|GO:0043565
Trre11g03791 482 Gene3D - 178 227 - -
Trre11g03791 482 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 221 IPR004827 GO:0003700|GO:0006355
Trre11g03791 482 Pfam bZIP transcription factor 178 219 IPR004827 GO:0003700|GO:0006355
Trre11g03791 482 MobiDBLite consensus disorder prediction 166 181 - -
Trre11g03791 482 MobiDBLite consensus disorder prediction 80 165 - -
Trre11g03791 482 PANTHER TRANSCRIPTION FACTOR TGA9 112 454 - -
Trre11g03791 482 Pfam Seed dormancy control 261 334 IPR025422 GO:0006351|GO:0043565
Trre11g03791 482 SUPERFAMILY Leucine zipper domain 179 220 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03791 Trre-Chr11 51213765 51221262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03791 137 482 bZIP Transcription Factor Family AT1G08320 68.768 1.06e-180 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre11g03791 DOG1 2.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03791 K14431 - gmx:100775461 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03791 11 51213765 51221262 Trre11g03791 11 51213765 51221262 ECH