Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03771 ATGGATGTTCAGCGTCTCATTGGATCTTCTGCCGGCAAAGAACCTCCTCAACAATTTGATTCTCTTAATCGTTTTCTTCATAACCTCTCCAATTTCGGTGATTCGATAACAACAATTCTCGTAACGAAAAAGAATGGCGGAAGAACACCGATGTCAAGCACCACGATTATGCCACCGACGAATTCACATGCGGTGGCGGTGGTTACTGAACCGTCTTCCTCGTCGCCAGATCCTGTTGCGCCGCCTAAAGTTGCGGTGGAGGAGAAACCGTTGCAACAGAATCGGTGTATGACGTGTAGGAAGCGCGTGGGACTCACGGGGTTTAAGTGCAAGTGTGGGATGATGTTGTGTGGGACCCACCGTTATCCGGAGCAGCATGATTGTGAGTTTGATTTCAAGGGGTTGGGAAAAGAGCAGATCGCAAAGGCGAATCCGGTGGTGAAAGGTGAAAAGCTTGAGAAGATTTGA 468 0.4872 MDVQRLIGSSAGKEPPQQFDSLNRFLHNLSNFGDSITTILVTKKNGGRTPMSSTTIMPPTNSHAVAVVTEPSSSSPDPVAPPKVAVEEKPLQQNRCMTCRKRVGLTGFKCKCGMMLCGTHRYPEQHDCEFDFKGLGKEQIAKANPVVKGEKLEKI 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03771 155 Gene3D - 69 151 IPR035896 -
Trre11g03771 155 SUPERFAMILY AN1-like Zinc finger 81 150 IPR035896 -
Trre11g03771 155 FunFam Zinc finger AN1-type containing 6 70 151 - -
Trre11g03771 155 Pfam AN1-like Zinc finger 96 132 IPR000058 GO:0008270
Trre11g03771 155 PANTHER AN1-TYPE ZINC FINGER PROTEIN 59 155 - -
Trre11g03771 155 SMART AN1_Zf_4 96 133 IPR000058 GO:0008270
Trre11g03771 155 ProSiteProfiles Zinc finger AN1-type profile. 90 136 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03771 Trre-Chr11 51012170 51015229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03771 76 155 C2H2 Transcription Factor Family AT3G52800 60.976 1.44e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03771 - - gmx:106795660 141.739