Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03735 ATGGGGAGCGACGGCGAAGGTGAGAAATCGGCGCAGAAAGAGATTGAAAGGAAGAAGATTCTTGCCTTGTTAAAAGAGCCGCTGAAAACAAGTGCATTAAGAGATGGGGTTAAGGAAGTGGTCAAAAGTATAAGGCGAGGTCAAAAAGGAGTGTGTGTTATAGCTGGGAACATATCGCCAATTGATGTCATCACTCATGTTCCTGTTCTATGCGAAGAAGCTGACATTCCATATGTATATGTCCCATCTAAAGAAGACCTTGCATCTGCAGGAGCAACAAAGAGGCCTACATGTTGTGTTTTAGTGATGACCAAGCCTTCAAAGGGTGAACTAGCTCAAGAGGCACAAGAAAAACTAAAGTCGGAGTACGATCAAGTTGCATCTGAAATCACTGAGCTAACAACATCACTTTTTTGA 417 0.4293 MGSDGEGEKSAQKEIERKKILALLKEPLKTSALRDGVKEVVKSIRRGQKGVCVIAGNISPIDVITHVPVLCEEADIPYVYVPSKEDLASAGATKRPTCCVLVMTKPSKGELAQEAQEKLKSEYDQVASEITELTTSLF 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03735 138 Gene3D - 14 133 IPR029064 -
Trre11g03735 138 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 18 128 - -
Trre11g03735 138 PRINTS Ribosomal protein L7A/RS6 family signature 68 78 IPR018492 -
Trre11g03735 138 PRINTS Ribosomal protein L7A/RS6 family signature 78 92 IPR018492 -
Trre11g03735 138 PRINTS Ribosomal protein L7A/RS6 family signature 33 47 IPR018492 -
Trre11g03735 138 PRINTS Ribosomal protein L7A/RS6 family signature 52 65 IPR018492 -
Trre11g03735 138 FunFam H/ACA ribonucleoprotein complex subunit NHP2 7 133 - -
Trre11g03735 138 SUPERFAMILY L30e-like 17 120 IPR029064 -
Trre11g03735 138 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 19 104 IPR004038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03735 Trre-Chr11 50673005 50674688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03735 36 105 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 28.571 2.38e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03735 K11129 - oeu:111397338 206.453