Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03734 ATGAAGTTTTGTGCTTGTTTTGCAACTACAAAGACAATACTCCCATTGCAAAACCTCTTGCTGGGAAGAAACTTTCCAAGAAAACACTCAAGCTTGTTAAAAGAGCCGCTGAAAACAAGTGCATTAAGAGATGGGGTTAAGGAAGTGGTCAAAAGTATAAGGCGAGGTCAAAAAGGAGTGTGTGTTATAGCTGGGAACATATCGCCAATTGATGTCATCACTCATGTTCCTGTTCTATGCGAAGAAGCTGACATTCCATATGTATATGTCCCATCTAAAGAAGACCTTGCATCTGCAGGAGCAACAAAGAGGCCTACATGTTGTGTTTTAGTGATGACCAAGCCTTCAAAGGGTGAACTAGCTCAAGAGGCACAAGAAAAACTAAAGTCGGAGTACGATCAAGTTGCATCTGAAATCACTGAGCTAACAACATCACTTTTTTGA 444 0.4077 MKFCACFATTKTILPLQNLLLGRNFPRKHSSLLKEPLKTSALRDGVKEVVKSIRRGQKGVCVIAGNISPIDVITHVPVLCEEADIPYVYVPSKEDLASAGATKRPTCCVLVMTKPSKGELAQEAQEKLKSEYDQVASEITELTTSLF 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03734 147 SUPERFAMILY L30e-like 27 129 IPR029064 -
Trre11g03734 147 Gene3D - 25 142 IPR029064 -
Trre11g03734 147 PRINTS Ribosomal protein L7A/RS6 family signature 42 56 IPR018492 -
Trre11g03734 147 PRINTS Ribosomal protein L7A/RS6 family signature 61 74 IPR018492 -
Trre11g03734 147 PRINTS Ribosomal protein L7A/RS6 family signature 77 87 IPR018492 -
Trre11g03734 147 PRINTS Ribosomal protein L7A/RS6 family signature 87 101 IPR018492 -
Trre11g03734 147 FunFam H/ACA ribonucleoprotein complex subunit NHP2 10 142 - -
Trre11g03734 147 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 31 113 IPR004038 -
Trre11g03734 147 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 31 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03734 Trre-Chr11 50673005 50675090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03734 45 114 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 28.571 9.94e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03734 K11129 - twl:119981267 195.282