Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03692 ATGGCTTTAACTTTTTCTTCTCCACACTTTCGTTTTCAACCTTTCCTCACACGCACAAACTACGTCTTCTTATCCGACCTTACTGAACATCAAGTCCACGATTCTCTCACTCTTCTTCGCCGGAGTAAGATCTCTGTTAATTCGCCACCGGCGTTGAAGCCAGTGAAATGCAGTAGATCGACGGAGGAGAAGCAGTGGAACGATGCAGAAACTGTTGCATCGGATTCCGATGAAGTTGTGGATGATTCAAATGGTCAAGCTCCGACCAGAATTTCTTCAATTGAGTCTCAGAGGGTTTCAACTACGTCTTCCGGCGATTCTCTTTCTCTCGGAATTCGAGAACCTGTTTATGAAGTAGTAGAAGTGAAATCAGATGGAACAGTATCGACTAGAAAAATCAACAGGAAACAATTATTGAAGTCAAGTGGTCTTCGTCCGCGGGATGTCCGAAGTGTGGATCCATCATTGTTTTTGACAAATTCAATGCCTTCTTTGCTGGTCCGTGAGTATGCTATACTTCTAAACCTGGGTTCATTACGAGCAATAGCAATGAAAGATTGTGTACTTATATTTGACTATAATCGTAAAGGAGGGCAAGCTTTTCTAGAGTCATTGCTACCTCGGTTGAATCCCAAGAACAATAATGGAGGACCATCAATGCCATTTGAAATCGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAACGTTTGGAGCGGAGACTGATGGACTTAGAACCTCGTGTTCAAGCTCTTCTTGAGGCCTTGCCAAATCGGATAACTGGGGACATATTGGAGCAACTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGCTCGAGGGCAGGAGCTCTCAGACAGATGCTGCTAGACCTTCTGGAGGACCCAAATGAAATACGGAGGATATGTATTATGGGAAGAAATTGTACACTTAATAAAGGAAACAATAACGTGGAATGCTCAGTTCCCTTAGAAAAGCAGGTTGCTGAAGAAGAGGAGGAGGAAATTGAGATGCTTCTGGAAAATTATCTCCAAAGATGTGAATCTTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAGCTTAAGCTCAAGAAGGCTTGAAGTTAGCAGGTTTGAACTGCTTCTCCAGGTTGGAACATTCTGTGTGGCAGTTGGTGCCCTTGTAGCAGGTATATTTGGCATGAACCTGAAGTCCTATCTTGAGGAACATGTGTTTGCATTTTGGCTGACTACATCTGGGATTATTATTAGTAGCATTGTTGTTTTTTTTCTTATGTATAACTACCTCAGAGCAAGGAAAATATTTTGA 1341 0.4221 MALTFSSPHFRFQPFLTRTNYVFLSDLTEHQVHDSLTLLRRSKISVNSPPALKPVKCSRSTEEKQWNDAETVASDSDEVVDDSNGQAPTRISSIESQRVSTTSSGDSLSLGIREPVYEVVEVKSDGTVSTRKINRKQLLKSSGLRPRDVRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMKDCVLIFDYNRKGGQAFLESLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLERRLMDLEPRVQALLEALPNRITGDILEQLRISKQTLVELGSRAGALRQMLLDLLEDPNEIRRICIMGRNCTLNKGNNNVECSVPLEKQVAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRFELLLQVGTFCVAVGALVAGIFGMNLKSYLEEHVFAFWLTTSGIIISSIVVFFLMYNYLRARKIF 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03692 446 CDD Mrs2_Mfm1p-like 119 445 IPR039204 -
Trre11g03692 446 MobiDBLite consensus disorder prediction 50 106 - -
Trre11g03692 446 Coils Coil 326 346 - -
Trre11g03692 446 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 84 445 IPR039204 -
Trre11g03692 446 MobiDBLite consensus disorder prediction 57 71 - -
Trre11g03692 446 MobiDBLite consensus disorder prediction 78 106 - -
Trre11g03692 446 FunFam Magnesium transporter MRS2-11, chloroplastic 112 193 - -
Trre11g03692 446 FunFam Magnesium transporter MRS2-11, chloroplastic 195 377 - -
Trre11g03692 446 Gene3D - 112 193 - -
Trre11g03692 446 Coils Coil 235 255 - -
Trre11g03692 446 Gene3D Magnesium transport protein CorA, transmembrane region 194 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03692 Trre-Chr11 50158546 50164627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03692 110 446 MRS2 Gene Family AT5G22830 82.493 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03692 K16075 - gmx:100808371 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03692 11 50158546 50164627 Trre11g03692 11 50158546 50164627 ECH