Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03691 ATGGCGGAGGACCGTAAAGATGGGAGTGATTACAGTTCAGAGGATGAAGGAACTGAAGATTACAGACGCGGTGGATATCATGCGGTTCAAACTGGTGATACTTTCAAACATGGGTGTTATGTGGTTCAGAGTAAACTTGGTTGGGGTCATTTTTCAACTGTTTGGCTTGCTTGGGATACTCAGAAATTGCGATATGTTGCTTTAAAAATTCAAAAGAGTGCTCAGCACTACACGGAAGCAGCAATGGATGAAATAAAGATTCTTAAACAAATTGCTGAAGGGGATCTCGAGGACAAGAAATGTGTTGTGAAGCTTTTGGACCACTTTAAGCATTCAGGGCCTAATGGCCAGCATGTTTGTATGGTTTTTGAATTCCTTGGTGATAATCTTCTCACACTTATCAAGTATAGTGATTATCGTGGTGTTCCCCTTTCCATGGTCAAAGAAATTTGTTACCATGTTTTGGTCGGTTTGGATTATTTGCATCGCCAGCTTTCTATAATACACACTGATTTGAAGCCAGAGAATGTCTTGCTTGTCTCTCCAATTGATCCATCTAAGGATCCTAGAAAATCAGGAGTCCCACTTGTACTTCCAAACACCAAGGGCAAGACTTTATCCAAGAATGGAACCACAAAAGATGATAAGAGTTCAAATGGAGATCTAACGAAGAACCAGAAAAAGAAAATGCGGAAAAAGGCTAAAAAAATAGCTCAGAAGGAAGGTCCTGAGGTAGCAGAGGAGGATTCCGAAGCACCTGAGCAAGATAATTGTAGTAATGATGTGAAACCAAATGCAGAAAATGGTGAAAGTAAATCTGATAGTCCTACAAGTAAAGATGAATCAGCAAAGACTAATGAAATTAAGGATGTTCCACAAGGAAGTCATGTCTCTAGGAGAGGTAGTCGCTCTACCAGAAAGAAGTTGCTCGAAGCTGTTGATCTTAAGTGCAAACTGGTGGATTTTGGCAATGCTTGTTGGACGTATAAACAATTTACAAATGATATTCAGACTAGGCAGTATAGATGTCCCGAGGTTCTTCTTGGTTCTAAATACTCAACTCCAGCCGATATGTGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGATAACTATGACAGGGATGAGGATCATCTAGCATTGATGATGGAGCTTCTTGGAATGATGCCTCGCAAGATTGCACTTGGCGGCCGTTATTCCCGGGACTTTTTCAATAGACATGGTGATTTGAGACACATTCGCCGTTTGCGATTCTGGCCTATTACAAAGGTGCTGACAGAGAAGTATGATTTCAGCGAGCAAGATGCAAATGACATGGCTGACTTCCTTGTTCCATTACTTGACTTTGTTCCTGAAAAGAGACCAACTGCCGCTCAGTGCCTAAATCATCCATGGATGAGTGCAGGTCCTCGGACTCTTGAGCCCTCACTGACTAACATGCAACCTGATGCTATCAACGGAGAAAAGTCTATAAAGGTGAAGGAAAAAACCGAGCAGGAGGCCGTGGAAGTTAGTATGGGGAATATGGCCATTGATGGAACTCCAAAACCACTCAAAGATTTCCAATCTACAAAACCATCGGAATAG 1620 0.4198 MAEDRKDGSDYSSEDEGTEDYRRGGYHAVQTGDTFKHGCYVVQSKLGWGHFSTVWLAWDTQKLRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDLEDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLSMVKEICYHVLVGLDYLHRQLSIIHTDLKPENVLLVSPIDPSKDPRKSGVPLVLPNTKGKTLSKNGTTKDDKSSNGDLTKNQKKKMRKKAKKIAQKEGPEVAEEDSEAPEQDNCSNDVKPNAENGESKSDSPTSKDESAKTNEIKDVPQGSHVSRRGSRSTRKKLLEAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPITKVLTEKYDFSEQDANDMADFLVPLLDFVPEKRPTAAQCLNHPWMSAGPRTLEPSLTNMQPDAINGEKSIKVKEKTEQEAVEVSMGNMAIDGTPKPLKDFQSTKPSE 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03691 539 FunFam CMGC/SRPK protein kinase 26 125 - -
Trre11g03691 539 MobiDBLite consensus disorder prediction 182 305 - -
Trre11g03691 539 SMART serkin_6 40 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g03691 539 MobiDBLite consensus disorder prediction 273 287 - -
Trre11g03691 539 SUPERFAMILY Protein kinase-like (PK-like) 35 486 IPR011009 -
Trre11g03691 539 MobiDBLite consensus disorder prediction 1 23 - -
Trre11g03691 539 MobiDBLite consensus disorder prediction 517 539 - -
Trre11g03691 539 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 10 500 - -
Trre11g03691 539 CDD STKc_SRPK 29 477 - -
Trre11g03691 539 Gene3D Transferase(Phosphotransferase) domain 1 123 478 - -
Trre11g03691 539 FunFam Serine/threonine-protein kinase SRPK-like protein 307 477 - -
Trre11g03691 539 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Trre11g03691 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Trre11g03691 539 MobiDBLite consensus disorder prediction 257 272 - -
Trre11g03691 539 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Trre11g03691 539 Pfam Protein kinase domain 314 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g03691 539 Pfam Protein kinase domain 40 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g03691 539 ProSiteProfiles Protein kinase domain profile. 40 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g03691 539 MobiDBLite consensus disorder prediction 208 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03691 Trre-Chr11 50145434 50149312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03691 7 527 EF-hand Containing Proteins AT5G22840 70.152 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Trre11g03691 Pkinase 2.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03691 K08832 - gmx:100791829 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03691 11 50145434 50149312 Trre11g03691 11 50145434 50149312 ECH
Trre11g03691 11 50145434 50149312 Trre7g01505 7 11279917 11283978 PCT