Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03686 ATGATGCAGGTACCTTGGTTAGGGAAACTGTTGGCCATCACTGCATTTTTTACAACTTGTGAGGTCCATTCAAATGATCGAAAAAATGAGCGTAACATGTTTTGCATTGATTGCATTGACAACCCATTTTGTGGATCTTGTATTAAGTCGCGTCATAAAGATCATAACGTAATCCAAATAAGGAGGTCATCTTATAGTGAAGTAGTTAAGACAACTGAAATTTACAAGCATGTAGACATTCTTGGAATTCAAACATATGTGATCAATAACTCTTCAGTTGTATTCTTAAGCAAGAGGACTCGACCCCATCCTAAGAGGAACAATATTTGCAAAATTGGCCATACTAGCAACTCTCATTGTAAGACATGTGATAGAAATCTTGTGGATTCTTCTTTCTTTTGCTCTTTAGCATGCAAGTTTGCATTTATAAAGAAGGATGGGGGCTTTTTCGCAAACCCAAAAGAAATGGAAGAAATGGAAAGACTGCTAGAAGAATCGGTCAAAGTATCACCATCAAAAGAAAAAGCTAAAAGTTTCCGTGAACAAAATCTAAAACGAAAAGCAGATGAAGCAGGGATTGATGAAGAAAATGAAGAGGATGAAGAGAAAAAAGAAAAAGAAAACAAAGAAAGTTCCCTTCTTGTTAGTCGTCCATCAACTTCATTTCGTAAGCCAAATTCAAGAAGAAAGGGAATACCTCACAGGGCTCCTTTTTTTTAA 720 0.3611 MMQVPWLGKLLAITAFFTTCEVHSNDRKNERNMFCIDCIDNPFCGSCIKSRHKDHNVIQIRRSSYSEVVKTTEIYKHVDILGIQTYVINNSSVVFLSKRTRPHPKRNNICKIGHTSNSHCKTCDRNLVDSSFFCSLACKFAFIKKDGGFFANPKEMEEMERLLEESVKVSPSKEKAKSFREQNLKRKADEAGIDEENEEDEEKKEKENKESSLLVSRPSTSFRKPNSRRKGIPHRAPFF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03686 239 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 238 - -
Trre11g03686 239 Pfam PLATZ transcription factor 61 139 IPR006734 -
Trre11g03686 239 Coils Coil 181 210 - -
Trre11g03686 239 Gene3D Classic Zinc Finger 17 79 - -
Trre11g03686 239 MobiDBLite consensus disorder prediction 173 239 - -
Trre11g03686 239 SUPERFAMILY B-box zinc-binding domain 18 64 - -
Trre11g03686 239 MobiDBLite consensus disorder prediction 173 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03686 Trre-Chr11 50114035 50115482 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre11g03686 PLATZ 1.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03686 - - cam:101499108 297.745