Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03678 ATGATGTCTCTCCCTTGGTTGGATAAGTTGTTTGCAATCACTGCATTTTTCACCGAATGCAAAGTCCATTATGAGAAATTCAACAAAAAACGGAACAAGTTTTGGTGCCTCGATTGTTATGACACTGTGTTTTGCGGATCTTGCATAACAGCTAGTCACAAAGATCATCGAATAATTCAAATAAGAAGGTTATCTTATAATGAAGCTATTAAGACGAATGAAATTTACAAGCATGTGGACATCTTAGGAGTTCAAACATATCATATTAGTAATTTTACAGCTGTATTCATAAATAAGAGGACTTTTGCACAACCTCTGAAAAACAAGAGTGGTAAAGTTGGTTACAATAGCATCTCACATTATAAGACATGCAAAAGAAATCTTGTGGACTCTTCTTACTTTTGTTCTTTGGCTTGCAAGTTTGAATACATAAAGAAGAATGGGGGCTTTTTTGTAAGCGCAAAAGAGATGAAAGAAATGGAAAGATTACTAGAGGAGTCGCTCAAGGAATCACCACCAAAACAAAGAGCAAAAAAATCACATGAACAAAATCTAAAACGAAAATTTGATGAAGCGGGAATTGATGAAGAAAATGAAGAGGAAGAAGACGACAATGAAGAAGAAGAAGAAGAAGACAAAGAAAGTGCCTTTCCAGTTAATCGTCCATCAACTTCATTTCATGAGCCAAATTCAAAAAGAAAGGGAAGCACGAATTCTGGGTTTGCTCGCTAG 732 0.3552 MMSLPWLDKLFAITAFFTECKVHYEKFNKKRNKFWCLDCYDTVFCGSCITASHKDHRIIQIRRLSYNEAIKTNEIYKHVDILGVQTYHISNFTAVFINKRTFAQPLKNKSGKVGYNSISHYKTCKRNLVDSSYFCSLACKFEYIKKNGGFFVSAKEMKEMERLLEESLKESPPKQRAKKSHEQNLKRKFDEAGIDEENEEEEDDNEEEEEEDKESAFPVNRPSTSFHEPNSKRKGSTNSGFAR 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03678 243 MobiDBLite consensus disorder prediction 165 193 - -
Trre11g03678 243 MobiDBLite consensus disorder prediction 194 213 - -
Trre11g03678 243 MobiDBLite consensus disorder prediction 218 243 - -
Trre11g03678 243 Coils Coil 191 216 - -
Trre11g03678 243 MobiDBLite consensus disorder prediction 165 243 - -
Trre11g03678 243 Pfam PLATZ transcription factor 62 140 IPR006734 -
Trre11g03678 243 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03678 Trre-Chr11 50003988 50006276 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre11g03678 PLATZ 7.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03678 - - cam:101499108 241.891