Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03676 ATGATGTTTGTACCTTGGCTAGAAAAATTGTTAGCTATCACAACCTTTTTTTCGGCATGCGAAGTCCACTCCACTGAATCCAAAAATGAATGTAACAAGTTTTGGTGTATCGATTGTTATGAGAATTTGTTATGTGAATCTTGCATAACAACTCTTCATAAAGGTCACAAAATTATTCAAATAAGGAGATTTTCTTATAAAGAAGTAATCAAGACGGTTGAAATTTACAAGCATGTGGACATCTTAGGAATTCAAACATATCCTATTAACAACTGTACAGTTGTATTCATAAACAAGAGTCCTATTCCACAACCCAAGACAAACAATCATGGTGAAAATTGTTATCGAGGCATCTCATGTTGTAAGACGTGCAAAAGAAATCTTGCAGATTTTTCATACTTTTGCTCTTTGGCATGCAAGTTTACATATATAAAGAAGGATGGGGGCTTTTTCGTAAACGCGAAAGAGATGGAAGAAATGGAAAAATTACTAGAGGAATCGATCAAGGAATCCCCACCAAAAGAAAGAGCAACAACATTACAAGAACAAAATCAAAAACGAAAAGCAGATCATGAATCAAGAATGGACGAAAAAAATGAAGAGGTTGAAGAGAAAGAAAAATATGATAAAGAAGAAGAAGACAACAAAGATAGTGTTCTTCCTATCGGTCCATCGGCTTCATTTCGTAAGCCAAACTCAAAAAGAAAGGGAATACCCCATAGGGCTCCTTTATTTTAA 738 0.3455 MMFVPWLEKLLAITTFFSACEVHSTESKNECNKFWCIDCYENLLCESCITTLHKGHKIIQIRRFSYKEVIKTVEIYKHVDILGIQTYPINNCTVVFINKSPIPQPKTNNHGENCYRGISCCKTCKRNLADFSYFCSLACKFTYIKKDGGFFVNAKEMEEMEKLLEESIKESPPKERATTLQEQNQKRKADHESRMDEKNEEVEEKEKYDKEEEDNKDSVLPIGPSASFRKPNSKRKGIPHRAPLF 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03676 245 MobiDBLite consensus disorder prediction 165 218 - -
Trre11g03676 245 MobiDBLite consensus disorder prediction 165 245 - -
Trre11g03676 245 Coils Coil 181 215 - -
Trre11g03676 245 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 244 - -
Trre11g03676 245 Pfam PLATZ transcription factor 62 140 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03676 Trre-Chr11 49984564 49986609 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre11g03676 PLATZ 3.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03676 - - cam:101499108 280.796