Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03597 ATGGCTACCATAGTTCAATATGCATTGGCCTTGTTTTGTTTATTGGTGTTGATGCAAAAGGGTGATGCCTATGAATTTGTAGTTGGAGGCCAAAACGGTTGGAGTGTTCCAAGTGACCCTAATGCTAACCCTTACAATCAATGGGCAGAAAAGAGCAGATTTCAAGTAGGAGACTCCCTAGTGTTCAATTACCAATCTGGCAAAGATTCAATAATTCAAGTAAACAGCCAACAAGACTATGAAAGTTGCAACACTGATGCTGCATCTTCTGCAAAAGCCTCTGACGGCCACACAGTAATCAAACTCAATAAATCAGGACCTCACTACTTCATAAGTGGAAACAAAAACAACTGTCTCAAGAATGAGAAGTTATTGGTGATTGTACTTGCTGACAGAACCAACAACTCAAACACAAACCAAACAACTCCTCCTCCTTCTCCTTCACCTTCTGTTTCTGTTTCTGTTTCTCCTTCTCCTTCTCCATTATCCTCACATTCATCAGATGCATTAGCTCCTATACTACCACCTGTTCAGCAAGTAGGTTTAACTCCACCACCTATTCAGCAAGTAGGTTCATCTCCACCACTAGGGACTGATGTGACAAATCCAATTACTCCAACTCCAGCTCCTGTTACTCAACCTCCTCCTCCTCCTCCTCCTAATACTGCTTCTTCAATCTTGGTTAGCTTTGGTTGTTCTGTCGGAGCACTCATGGTTTCAGTTCTGGTTTTTTTCAAGTGA 741 0.4197 MATIVQYALALFCLLVLMQKGDAYEFVVGGQNGWSVPSDPNANPYNQWAEKSRFQVGDSLVFNYQSGKDSIIQVNSQQDYESCNTDAASSAKASDGHTVIKLNKSGPHYFISGNKNNCLKNEKLLVIVLADRTNNSNTNQTTPPPSPSPSVSVSVSPSPSPLSSHSSDALAPILPPVQQVGLTPPPIQQVGSSPPLGTDVTNPITPTPAPVTQPPPPPPPNTASSILVSFGCSVGALMVSVLVFFK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03597 246 ProSiteProfiles Phytocyanin domain profile. 24 130 IPR003245 GO:0009055
Trre11g03597 246 Gene3D - 22 131 IPR008972 -
Trre11g03597 246 PANTHER BLUE COPPER PROTEIN 24 150 IPR039391 GO:0009055
Trre11g03597 246 MobiDBLite consensus disorder prediction 135 222 - -
Trre11g03597 246 SUPERFAMILY Cupredoxins 23 130 IPR008972 -
Trre11g03597 246 MobiDBLite consensus disorder prediction 183 206 - -
Trre11g03597 246 MobiDBLite consensus disorder prediction 207 222 - -
Trre11g03597 246 CDD OsENODL1_like 24 129 IPR041846 -
Trre11g03597 246 Pfam Plastocyanin-like domain 34 120 IPR003245 GO:0009055
Trre11g03597 246 FunFam Early nodulin-like protein 1 23 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03597 Trre-Chr11 49242748 49244341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03597 1 167 Phytocyanin Superfamily AT3G20570 46.328 4.88e-51 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03597 - - gmx:100788637 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03597 11 49242748 49244341 Trre11g03597 11 49242748 49244341 ECH