Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03595 ATGAAATTGTTTAAGGAAGCAAATACTTCCTCCTACCAAACATTTCTCTTATTATTATTGTTGTTTATCTTCTTCGGTTTTGAAATTTGTCACGGACAAGACGATGACCTTGCGGACATTGCGGCACCGCCACCACCACCGGCCGAACTCGACAACTGCAATGGAATATTTCTAACGTACAGTTTAACATCGAGGGAAAAAGAATTTCCGCACGTGAAAAATGTGTCGGCACAGGCGTGGGCGTTTAAAGCGGAAGCTTCATTGATGAATGTTGGGGATGAGGAATTGAAAGGTTGGCAAATGTATATTGGGTTTCAGCATAGGGAGATTCTTGTTTCGGCCGACGGGGCTGTTCCGGTTGACGCGGAGGATTTTCCGGCTGAGGTAGGAAATGGGACTACACTTGCTGGGAGTTCTGCGACGGATTTGAGGACTGCGATCGAAACGGCTGGTGATTATACTCAAATGACTGTTCGGGTTCAGATGAGTGGAACTCAGTTTGGACTTGGTGCTGGTGGTAAACCTATGCCTAAAACTATCAAGCTTGTTAACGATGGCTTCAAATGTCCCCCAGCTAGTCGTCAAGGTTCAAGAATGTTTGTATGCTGCAAAAAGGATCCAAAATTCAAAGCCAAACTTGCCAAGAAAACAAAGTTCCTTCCTCGTCGGTATGGCGACCTAACCATAGCATACGACGTACTTCAATCCTTCAAAACCAGCTACTTCGTACAATTAACCATAGATAACAATCATCCATTAGGTCGTCTCGATCATTGGAACATAACATGGGAATGGCAAAAAGGCGAGTTCATTAACACGTTAAAAGGTGCTTACGCTCGCATAAAAGACCCTTCTGAATGTTTATATGGTCCTGCTGGAAGATACTATGGTGACTTAGATTTCTCACAAGTTGCAAACTGTCAAAAAAAGCCTATTCTCTCTGATCTTCCATCTGAAAAAGCAGAAGATGAAAAAGTTGGTAAATTACCTTGGTGTTGTAGGAATGGTACTGTTTTACCACCTGTTATGGATAAGAACAAAGCAAGATCAATTTTTCAAATGCAAGTTTTTAAAATCCCACCTGATGATAACAGAACAGCAATTACACCACCATTGAAATGGAACATTGATGGTGTTATTAACCCTAAATACACATGTGGACGACCAATTAGGGTTGATCCACAACAGTTTCCTGATCCAAGTGGACTTAAAGCAATTTCAACAGCTTTTGCCAGTTGGCAAATAGTTTGCAATATGACAAAACCGAAGCCGAAAGAAAATCGTTGTTGTGTTTCGTTCTCGGCTTTCTATAATGAATCTGCTATCCCTTGTAACACATGTGCATGTGGTTGTGATGATACAAGAAAGTGTAATGCCAATGCTCAACCTTTACTTCTTCCACCTGACGCGCTTCTTGTCCCTTTTGTGAATAGAACACTAAAGGCGCGAGCGTGGGCGAAACTCAAACACATGCGTGTTCCGACTAAGTTACCTTGTGGAGATAATTGTCCTGTTAGTATTAACTGGCATGTTAGTTCTGATCATAAGGAAGGATGGACGGCTAGGATGACACTTTTCAATTGGGAAGATTTTGCTTTTGATGATTGGTTCACCGCAATTAAGTTCGATAGGTCTTTTGAAGATTTTCAAGATGTTTACTCGTTTAATGGAACGAGAATCCCCGGTATCAAAACCATTTTCTTTCAAGGACTTAAAGGTTTGAATTACTTAGCTGGAGAGACTAATGGAACTCGTGTTGGCGATCCAAGGGTGCCAGGGAAACAACAGACTGTGATCTCTTTTCATAAGAAACACATGAAAGATTTCAATGTTGTGCGCGACGCTTTTCCTTCTAAGGTTTACTTCAATGGAATGGAATGTGCATTACCTCCACATAGACCTGCTAAAAGTTTAGGGCATAAATCTTCTATCAGTGTCGTTGCAGTCATTTTCACAGCTTTTATGACATTCTTGCTCATGACAGATCGCTTTTTCTGA 1998 0.4139 MKLFKEANTSSYQTFLLLLLLFIFFGFEICHGQDDDLADIAAPPPPPAELDNCNGIFLTYSLTSREKEFPHVKNVSAQAWAFKAEASLMNVGDEELKGWQMYIGFQHREILVSADGAVPVDAEDFPAEVGNGTTLAGSSATDLRTAIETAGDYTQMTVRVQMSGTQFGLGAGGKPMPKTIKLVNDGFKCPPASRQGSRMFVCCKKDPKFKAKLAKKTKFLPRRYGDLTIAYDVLQSFKTSYFVQLTIDNNHPLGRLDHWNITWEWQKGEFINTLKGAYARIKDPSECLYGPAGRYYGDLDFSQVANCQKKPILSDLPSEKAEDEKVGKLPWCCRNGTVLPPVMDKNKARSIFQMQVFKIPPDDNRTAITPPLKWNIDGVINPKYTCGRPIRVDPQQFPDPSGLKAISTAFASWQIVCNMTKPKPKENRCCVSFSAFYNESAIPCNTCACGCDDTRKCNANAQPLLLPPDALLVPFVNRTLKARAWAKLKHMRVPTKLPCGDNCPVSINWHVSSDHKEGWTARMTLFNWEDFAFDDWFTAIKFDRSFEDFQDVYSFNGTRIPGIKTIFFQGLKGLNYLAGETNGTRVGDPRVPGKQQTVISFHKKHMKDFNVVRDAFPSKVYFNGMECALPPHRPAKSLGHKSSISVVAVIFTAFMTFLLMTDRFF 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03595 665 PANTHER COBRA-LIKE PROTEIN 7 13 660 - -
Trre11g03595 665 Pfam COBRA-like protein 241 420 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03595 Trre-Chr11 49226717 49229779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03595 12 662 COBRA Gene Family AT3G20580 60.968 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03595 - - gmx:100789175 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03595 11 49226717 49229779 Trre11g03595 11 49226717 49229779 ECH