Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03519 ATGGCCTCTGAGAATGAATCAACAAAGTTACCCTTTAATGGTGAAACTGGAAATGTAAGAAACAAAGGTAGAAGAAACAACGGAAAAGGACCTAACAAAACACCACAAAGAGGTGTTGGTGTTGAAAAACTTGAAAAAATGAGATTACAACAAGAATCATTCAAAACTTTTAATCAACAACAACAACAACTTCTTTTCAGTAACTATGCTGCATTTCATCAATTTCCTCAACAACAACAAGTGATGATCAACAACAACAACAACAACAATATCAACAATGTTGTTTGTTCTTCTGGTTTTGGTGTTGGATCAGCTTCAGCTTCATCTTCTTCTTCTATTGGTTATGGTTGGGTTTTTAGAAACCCTTTTGAGAACTCTTCTAAAAAAGATCTCTCTTCAATCCCAAATCTCAATCATCATCAATCTCTTGATCTTTCTCTCAAGAAAACTCGTTTGAATGAGGAGAATATAATGATGAGATCAGGAACAAATTCAAAGAGAGAAATGCCTTTGGAGGTTTGGAAGCATAATCCTGTTCATCATAATTTTCATGGATTTATGCCTCAAGCTTCTGTTTTTGCTTATCCAACTCAAAATTTTGATGAGAAAACTCGTCTGAATGAGGAGAATGTAATGATGATGAGAGGAACAAATGCAAGGAGAGAAATGAATCATCATAATTTTCCAATTGGATTTATGCCTCAACCTTCTGTTTCTGCTTATCCAACTCAAAATCATGAAGAGTGTGTGGAGGTTGTAGCTGTTCATAGGAAGGGAGATTCTTCATTAGGGAGTGGAAGAGTTTTTATGGAATATGAATTCTTCCCTAAAAAAGATGGAAAAAGCACTTTTACTGCTACTGCAAAAGACCTTTTTCCTACAACTACAAATTCAATAGGTTTGGGCTCTGGTGAAGCTTCTTCTTCTATCACAATTACATCTTATGGAGATATTTCTACTGATGATTCAGTTGATTTATCTCTTAGACTTTGA 993 0.3474 MASENESTKLPFNGETGNVRNKGRRNNGKGPNKTPQRGVGVEKLEKMRLQQESFKTFNQQQQQLLFSNYAAFHQFPQQQQVMINNNNNNNINNVVCSSGFGVGSASASSSSSIGYGWVFRNPFENSSKKDLSSIPNLNHHQSLDLSLKKTRLNEENIMMRSGTNSKREMPLEVWKHNPVHHNFHGFMPQASVFAYPTQNFDEKTRLNEENVMMMRGTNARREMNHHNFPIGFMPQPSVSAYPTQNHEECVEVVAVHRKGDSSLGSGRVFMEYEFFPKKDGKSTFTATAKDLFPTTTNSIGLGSGEASSSITITSYGDISTDDSVDLSLRL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03519 330 MobiDBLite consensus disorder prediction 1 33 - -
Trre11g03519 330 PANTHER OS01G0212500 PROTEIN 13 330 IPR040356 GO:0003700
Trre11g03519 330 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03519 Trre-Chr11 47975856 47977678 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NOZZLE Trre11g03519 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03519 - - cam:105852312 171.014