Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03510 ATGTATTCCGAACCAGAATTTCCCATTCCAAGTAGGAAGGATTTGGAAACCATCAAGTACTACTTCGACAACGAAACAGAGTTCATGGCTACAAGAAACTTCTTCAACGACGATCGGAACATTCTTATCCGCAGAAATGCCGTTTCAATAATCGCTAAGGTAACAAAGAAGATTGATCCAGATGCATTTGTTCCATATCGTGCTATGAACTACTTTGATCGCTTCTTATCACGTTGCGACATGACGGATGTGGAAGGTCGGACTGATACCGAAAAAGTTCATTTGATTGCTATATCTTGTTTCACCATATCTGCCAAGATGTGGATAGACCTTAGTCACATAATTCTCCTAAAAGGTGACGAACCGCGAATTGGTTCGCGCGTACCAATTCGTGCGTACCGCGTACCCGAACCCGTACCGCGTACCGAAACGAATTGCGAACCGTGTGACTATGGGATAGACTCATTCCCGGTTGACCAGTTTTTGTCCGACGTAAAGAGGGACATGAGTGTGAGGCTAAGTCATGACATGGTAATGAGAATGGAGTTTCTCATTCTACAAGTACTTAGCTGGAAAATGAAATCTGTGACTGCCTTCTGTTTTCTGAACCACTATTACCCTCACTTTAGACAATTCCGTGGTTTTAAACGCCGTAGCATTAATGAGATCATAGTTCAAGCACAAGGAGAGCACACTTTTGTTGACTTCATGCCTTCTCACATTGCATTCTCCGCTTTTCTGGCTGCTGCCAAAATTGCATATCCCTTAAAGTATAAGGAAATTGCAGAAGACATTGAAAGCAAACTTAACGATCAAGGACAGGTGAAGGAATGTGCAGAGAAGATGATAGATCTTTGCAGAAGGCTGAACATCCTGATAGATACCCCTAGATCAGGAATTCACTCTGCTTCAAGTGAAGCCGTGGCAGTACCCCAAAAGGAAACCAAAGATAAAGCGGTGGTGGTTGATGATTCATCTGAAGAAGAAGATCGGACTGTGTTAATCGACAAGCGAAGACAGGACATAGGAAAGATGGAGACTTCTCAATTGCAGGTGCAGGAGGGGCCGGAGAAGTTATCTGATAACAAATATGTAGCAGCAGAAGAGACCAAGGCATCCATTTCAGAGATTGAAGAGGAGCTTGTAGAACCAAAGAAGCTAATGAACTTTGAGCTGAAGTGGGCCACTGATGTTCCATCACTAGAAGCGCAGCCACGAGAGTCTATAACTATAAGCTTTAGGATACCAGGGACCGGAAAGAATATAAATTTAGGCTGCTGTACCTGCAACATCAGTTAG 1299 0.4342 MYSEPEFPIPSRKDLETIKYYFDNETEFMATRNFFNDDRNILIRRNAVSIIAKVTKKIDPDAFVPYRAMNYFDRFLSRCDMTDVEGRTDTEKVHLIAISCFTISAKMWIDLSHIILLKGDEPRIGSRVPIRAYRVPEPVPRTETNCEPCDYGIDSFPVDQFLSDVKRDMSVRLSHDMVMRMEFLILQVLSWKMKSVTAFCFLNHYYPHFRQFRGFKRRSINEIIVQAQGEHTFVDFMPSHIAFSAFLAAAKIAYPLKYKEIAEDIESKLNDQGQVKECAEKMIDLCRRLNILIDTPRSGIHSASSEAVAVPQKETKDKAVVVDDSSEEEDRTVLIDKRRQDIGKMETSQLQVQEGPEKLSDNKYVAAEETKASISEIEEELVEPKKLMNFELKWATDVPSLEAQPRESITISFRIPGTGKNINLGCCTCNIS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03510 432 Pfam Cyclin, C-terminal domain 196 287 IPR004367 -
Trre11g03510 432 Gene3D - 36 116 - -
Trre11g03510 432 Gene3D - 163 291 - -
Trre11g03510 432 SUPERFAMILY Cyclin-like 14 193 IPR036915 -
Trre11g03510 432 PANTHER CYCLINS 19 283 IPR039361 -
Trre11g03510 432 SUPERFAMILY Cyclin-like 176 291 IPR036915 -
Trre11g03510 432 Pfam Cyclin, N-terminal domain 17 193 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03510 Trre-Chr11 47895582 47898674 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03510 14 258 Core Cell Cycle Gene Families AT4G03270 26.848 9.66e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03510 - K18812 tpra:123896490 583.178