Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03479 ATGACCTTCCGAACTACTATCATAAAGTTATTATTTTTTTATATAATTATTCTCCTCCCAACTCTTGTTTCAAGTGATTCATGCACATGTGAAACAAAACAAACTAAAGGAAATAATGAAAACAATGAAGCTTTTCATTACAAACTTGGTTCAATTGCTTCTGTGCTTGTTTGTGGTGCTCTTGGTGTAAGCCTACCCTTATTAAGCAAAAGAATTCCAATTCTAAGTCCTAAAAATGACATATTTTTCATGATTAAAGCCTTCGCGGCCGGGGTAATTTTAGCTACCGGATTCATACACATACTTCCTGAAGCATTTGAGAGTTTGAATTCACCTTGTCTTAAGGAAAAACCTTGGGGAGATTTTCCATTTGCTGGACTTGTTGCTATGTTATCTTCTATTGCAACTTTGATGGTTGATTCATTTGCATCTAGTTATTATCAAAGAAGACATTTTAATTCTTCTAAACAAGTTCCTCATGAAGATGAAGAAAAGGGTGATGAACATGTTGGTCACATACATGTTCATACACATGCTACACATGGTCATACTCATGGATCAACTTCTCATGATTCAATATCATCTGAACTAATTAGGCAAAGGATCATATCACAAGTGTTGGAGCTAGGAATAGTGGTACATTCAGTGATTATTGGAATATCTTTAGGTACTGCACAAAGTATTGATACCATAAAGCCTCTCCTAGTGGCCTTGTCTTTCCATCAATTTTTTGAGGGAATGGGGCTTGGTGGTTGCATATCGCAGGCAAAATTTGAGTCTAGATCCACAGCAATCATGGCAACATTTTTCTCCCTAACAACACCAATTGGGATAGCAATTGGGATTGGAATATCTAGTGGATACAAAGAGAATAGCCCAACATCTCTAATTATTGAAGGGGTTTTCAATTCTGCTTCAGCTGGAATTTTGATTTACATGGCATTAGTTGACCTATTAGCAGCTGATTTTATGAGTCCAAGATTGCAAAATAATTTGAAGATCCAAATAGGAGCAAATATTTCACTTCTTTTAGGTTCAGGTTGCATGTCCTTATTGGCCAAATGGGCCTAA 1071 0.3613 MTFRTTIIKLLFFYIIILLPTLVSSDSCTCETKQTKGNNENNEAFHYKLGSIASVLVCGALGVSLPLLSKRIPILSPKNDIFFMIKAFAAGVILATGFIHILPEAFESLNSPCLKEKPWGDFPFAGLVAMLSSIATLMVDSFASSYYQRRHFNSSKQVPHEDEEKGDEHVGHIHVHTHATHGHTHGSTSHDSISSELIRQRIISQVLELGIVVHSVIIGISLGTAQSIDTIKPLLVALSFHQFFEGMGLGGCISQAKFESRSTAIMATFFSLTTPIGIAIGIGISSGYKENSPTSLIIEGVFNSASAGILIYMALVDLLAADFMSPRLQNNLKIQIGANISLLLGSGCMSLLAKWA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03479 356 Pfam ZIP Zinc transporter 46 353 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre11g03479 356 NCBIfam ZIP zinc/iron transport family 30 356 IPR004698 GO:0005385|GO:0016020|GO:0071577
Trre11g03479 356 PANTHER ZINC/IRON TRANSPORTER 44 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03479 Trre-Chr11 47438613 47441045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03479 5 356 Inorganic Solute Cotransporters AT3G12750 61.625 3.66e-153 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03479 K14709 - gmx:100805124 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03479 11 47438613 47441045 Trre11g03479 11 47438613 47441045 ECH