Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03476 ATGCATAAATTGGGGAGAGGTCATCGGGATAAACTCCAGCAGTTCGTAACGATAACCGGAGCTAGCGAGAAAGTAGCAATGCAAGCTCTGAAGGCTAGTGATTGGAATCTTGAAGGAGCATTTGATTATTTTTATAGCCAGCCTCAACTTAGAACCTTCACTGATTCAAGACACTTGGAGGAGCTGTACAATAGATATAAAGATCAATACATCGATATGATTTTTGCAGACGGCATCACTCTCCTTTGCAACGATATCCAGGTGGATCCTCAAGACATAGTAATGTTAGTTCTTTCGTGGCACATGAAGGCCGGAACAATGTGTGAATTTTCCAAGAAGGAGTTCATTGAAGGCTTACAATCTTTGGGGATTGATTCACTGGAAAAGTTCCGTGAAAAGATACCATCTATGCGCGCTGAGCTGAAAGATGAACAAAAATTTCGTGAGATATATAACTTTGCTTTTGGCTGGGCAAAAGAGAAGGGTCAAAAATCTCTGGCTTTGGATACAGCTATTGGAATGTGGCAATTATTATTTGCCGAGAAGCAGTGGCCACTGGTTGATCATTGGTGCCAATTCCTGCAGGCTCGGCATAACAAAGCAATATCTAGAGATACATGGTCTCAACTGTTGGAGTTTGCAAAGACTGTTAGCTCAAATTTATCTGACTATGATGCTGAAGGTGCTTGGCCGTATCTTATTGATGAGTTTGTCGATTATCTGAAAGAGAACGGTGTTAACCAACATGGACAGATCAATGATTCTAGTCTAAATTGA 777 0.4106 MHKLGRGHRDKLQQFVTITGASEKVAMQALKASDWNLEGAFDYFYSQPQLRTFTDSRHLEELYNRYKDQYIDMIFADGITLLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFIEGLQSLGIDSLEKFREKIPSMRAELKDEQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQARHNKAISRDTWSQLLEFAKTVSSNLSDYDAEGAWPYLIDEFVDYLKENGVNQHGQINDSSLN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03476 258 FunFam Defective in cullin neddylation protein 143 248 - -
Trre11g03476 258 ProSiteProfiles DCUN1 domain profile. 54 242 IPR005176 -
Trre11g03476 258 PANTHER RP42 RELATED 22 245 IPR014764 -
Trre11g03476 258 FunFam Defective in cullin neddylation protein 6 47 - -
Trre11g03476 258 Gene3D - 53 142 - -
Trre11g03476 258 Gene3D Cullin, PONY binding domain 143 251 IPR042460 -
Trre11g03476 258 CDD UBA_DCNL 8 48 - -
Trre11g03476 258 FunFam Defective in cullin neddylation protein 53 142 - -
Trre11g03476 258 Gene3D - 6 47 - -
Trre11g03476 258 Pfam UBA-like domain 9 47 - -
Trre11g03476 258 Pfam Cullin binding 130 240 IPR005176 -
Trre11g03476 258 SUPERFAMILY UBA-like 7 46 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03476 Trre-Chr11 47336356 47349578 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03476 K17822 - gmx:100795410 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03476 11 47336356 47349578 Trre11g03476 11 47336356 47349578 ECH