Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03436 ATGCAGAAACATCAATACAATTCCATGGAACCTCGAAACGAGGAATACCATTCTGCACCGCAACCGGTCCTGCAAGATCATCTGGATGGCATGCATACCAATACAAGGCCGCCTCCTTCCTTCAACATGCCAGAAAATAAACCTGTACATAATTTCTCCATACAGACCGGTGAGGAATTCGCTCTCGAGTTTATGAGGGATAGGGTGAATGTCAAGAAGCCTTCATTTCCAAATGTTGTCAGCGAACCTAATTATGCGACAGGGTATATGGAATTGAAAGGAATTTTAGGTCATCCAGGATCTGAAAGTGGTCCCGATATTTCTATGCTCGCAAGTATTGAAAATGTTCCGAAAGAGTTTGACAGAAGGAATTCTGTTCTACATCAGGAAAGAAGTAATTATGGCTCGGCTCGATCAATTCCTAGATCATCGTCAAATCAAGACAATAACCGAGTCCTTCATGGTATTTCTTCTTCTGGAGGTTCTGACAGCTTATCATTGAAGATGAAGATTCTATGTAGCTTTGGTGGTAGAATATTACCACGGCCAAGTGACGGAAAGCTTAGATATGTCGGTGGTGAAACACGGATTATTAGTATAAGAAAGGACATAAGTTGGCCGGAACTTTTGCAGAAAATATCATCAATCTATAATGATACTCATGCAATAAAGTATCAGCTCCCTGGAGAAGATCTTGACGCCCTAGTTTCAGTATCATCTGACGAGGATCTTCGGAATATGATGGAGGAATGTCATGACCTACAAAGAAGAAGAGGATCCTTGAAGCTTAGGATGTTCCTATTCTCGATAAATGATCTGGACGATACTCAGTTTGGTCTAGGTAGCATGGATGGTGGTGATTCTGAAATCCAATATGTAGTTGCTATTAATGGCATGGGCATGGAATCAAGAAGCAACTCTATCCTTCGTTGTGCCGGAAGTTCTAATAGTATTCACGAGCTAGACAGACAAAATATTGACAGGGAGACCAAAAGAGCTGTGGTAGAATCATATGGTGTCGGCGGTTCTTCCTTGACTGGCAATGTTAACTCGGTATTGACAAATCAGTCTTCACAACCAATGCTACCAACATCATCAAATGCTTATGAAGCCTATCCGTTCTTTTATGAGGATCCGATCATTCAACAAGCGGCAACTAGTCAATATCCAATACACAATGGCCCTTTTCCTACTAGCAGTTCGGCTCGCAATCTAGGAGAGGTTCCGGTTTCTTTGCCTACTCATAGTCTTGCGAACCAAGGAATCGTGAGCGAAGGACAAGCATCCAGTGAGTTTCAAGTACAAAGAAAAGGTGATAATGTCATTCATACAGCGAATGATCGAGTAAAAGTTTTATCAACAGAAGCACCATATTCTCTTCCTTCGCATCCATTTGAGGGAAGTTTGCAAGGTAATTTATCAGAGGCAGCAGTTCCAGTTTCTGTATCAGAAGCACTCCATCCTGCACTGCCATTAGAAAACAAGATTCCAGCTGTTGTATCCGAAGCTCTGAATCCACAGATTTCAAGACCGGGTGAAGATGACTTCTATACTGCATCCGCAGATGCATTCAGTCGTGCTCTTGTTGATGCCGAGTCCAATGTAATTGATTTCAGTTGCCTTGAACCACCTCCACTTCCTAATAGAGTCTATTATTCAGAGAGAATTTTTCCTCGGGAGCAAGCAGATTTGCTGAACCGGTCCGCAAAGTCAGATGATGCATATGGTTCTCACTTACTCATGTCAGATTTACTTTCTGATTTGAACCATATGAATTCAGTTAATGAATCCAGCGACATGTTGCACAACGAGAATCTGTCGAATCTGAATACAGCGTCGAACTCATCAGCAAAGCCTTTGCGTGCAGATAGCCATATCATCAACAAACATTTGCCTGATGCAACAAGTCAAGCAAACTCAAAGTTATATCAGCTTGTGGATTCTGATTTGAAGCGGGTATTATCAGATAACAAAATTTCTGAAAATGAGACAAATGTATCCAAAGATAGTCCTAGAGCTCTTCAAGTTGATGAAACCAAGGGCAGTGAGCGTCTTCCATTTCGCCGAGTTCCTTCTGTTGAACATAATGTGAATCAAGCATCTAAACTTCAAGATAACAATTTGTCTGAGGTTCCTACAAGGGAACCTCTTGATGCTAAATCCAAACCATCTCAGGGTGACATTCTGATCGACATTGAAGACAGGTTTCCGCGTGATTTCCTTTATGATATGTTCTCGAAAGCAGCTCATTCTGAAGATTCCGCAAACATTAGTCCACTACCAGCTGATAGAGCCGGTTTGAGCTTAAAAATGGACAATCATGAGCCTAAAAGTTGGTCATATTTTCAGAAGTTGGCTCATGAGGGGTTCGATAATAATGTTTCTCTAATTGATCAGGATAATCTCGGTTTTTCATCTGCTGTTAGTAAAGCAAAAGAAGGGGATAGTATGTTACAGCATTCAGCTCCTCTACCAGCAGAGAGTGTTATTCTGACAGGACCCAAAGAATCCCATTCCCACCTAAATTTTGGAGAGGAAAATCAGAAATTTTTACCTGCAACCACTAAAACCGAGGCTGTTGTATTTCAACCAGAAAATAACCCTTTTGAACTTAAGGGAGATGAAAATACAAACGTTAGCACCACAGTGGAAAACGTAAGACCACAGGAATCTGAATATCAGGATGACAATAGTGAGACAAGGGATGTGGTTGTAGCTCCAGATACTATTTTTGGGGAGTTTGATATCAGTACTTTGCAGATCATAATGAATGCGGATCTTGAAGAGCTGAGGGAACTCGGTTCTGGCACTTTTGGGACTGTGTATCATGGAAAATGGCGTGGATCAGATGTTGCAATTAAAAGAATAAAGAAAAGTTGTTTCTCCGGTCGTTCTTCAGAACAAGAAAGACTGACCATAGAGTTTTGGCGGGAAGCTGACATACTCTCCAAGCTTCATCATCCAAACGTGGTGGCATTTTATGGTGTAGTTCAAGATGGACCAGGAGGTACAATGGCTACTGTTACTGAGTTCATGGTCGATGGTTCTCTCCGTCATGTTTTGCTACGTAAGGATAGGTATCTTGATCGCCGCAAGAGGCTGATAATTGCCATGGATGCAGCTTTTGGAATGGAGTATTTACATGCAAAAAATATCGTTCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACTTGAAGGATCCTTTACGGCCAATATGCAAGGTTGGCGATTTTGGCCTGTCAAAAATTAAGCGGAATACCCTGGTGACTGGTGGTGTGCGTGGAACTCTACCTTGGATGGCACCAGAACTGCTGAACGGGAGTAGCAATAAGGTTTCAGAAAAGGTTGATGTATTCTCCTTTGGCATTGTATTATGGGAGATTCTTACCGGGGAGGAGCCATATGCTAATATGCACTATGGTGCAATCATAGGAGGCATTGTGAACAACACATTAAGACCAACAATCCCAGGTTATTGCGATATAGAATGGAGAACACTAATGGAACAGTGTTGGGCACCTAATCCTGCAGTCAGACCATCCTTTACAGAAATTGCACGCCGCTTGCGTGTTATGTCTGCGGCAGCTGTTCAGAGCAAAGGACAAGGACATAAAGCATCTAAATGA 3630 0.4187 MQKHQYNSMEPRNEEYHSAPQPVLQDHLDGMHTNTRPPPSFNMPENKPVHNFSIQTGEEFALEFMRDRVNVKKPSFPNVVSEPNYATGYMELKGILGHPGSESGPDISMLASIENVPKEFDRRNSVLHQERSNYGSARSIPRSSSNQDNNRVLHGISSSGGSDSLSLKMKILCSFGGRILPRPSDGKLRYVGGETRIISIRKDISWPELLQKISSIYNDTHAIKYQLPGEDLDALVSVSSDEDLRNMMEECHDLQRRRGSLKLRMFLFSINDLDDTQFGLGSMDGGDSEIQYVVAINGMGMESRSNSILRCAGSSNSIHELDRQNIDRETKRAVVESYGVGGSSLTGNVNSVLTNQSSQPMLPTSSNAYEAYPFFYEDPIIQQAATSQYPIHNGPFPTSSSARNLGEVPVSLPTHSLANQGIVSEGQASSEFQVQRKGDNVIHTANDRVKVLSTEAPYSLPSHPFEGSLQGNLSEAAVPVSVSEALHPALPLENKIPAVVSEALNPQISRPGEDDFYTASADAFSRALVDAESNVIDFSCLEPPPLPNRVYYSERIFPREQADLLNRSAKSDDAYGSHLLMSDLLSDLNHMNSVNESSDMLHNENLSNLNTASNSSAKPLRADSHIINKHLPDATSQANSKLYQLVDSDLKRVLSDNKISENETNVSKDSPRALQVDETKGSERLPFRRVPSVEHNVNQASKLQDNNLSEVPTREPLDAKSKPSQGDILIDIEDRFPRDFLYDMFSKAAHSEDSANISPLPADRAGLSLKMDNHEPKSWSYFQKLAHEGFDNNVSLIDQDNLGFSSAVSKAKEGDSMLQHSAPLPAESVILTGPKESHSHLNFGEENQKFLPATTKTEAVVFQPENNPFELKGDENTNVSTTVENVRPQESEYQDDNSETRDVVVAPDTIFGEFDISTLQIIMNADLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFSGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHAKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPGYCDIEWRTLMEQCWAPNPAVRPSFTEIARRLRVMSAAAVQSKGQGHKASK 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03436 1209 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 920 1014 - -
Trre11g03436 1209 SMART serkin_6 927 1193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g03436 1209 Gene3D Transferase(Phosphotransferase) domain 1 1015 1209 - -
Trre11g03436 1209 CDD STKc_MAP3K-like 933 1190 - -
Trre11g03436 1209 Gene3D - 187 269 - -
Trre11g03436 1209 ProSiteProfiles Protein kinase domain profile. 927 1192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g03436 1209 CDD PB1_UP2 172 268 - -
Trre11g03436 1209 Pfam Protein tyrosine and serine/threonine kinase 928 1190 IPR001245 GO:0004672|GO:0006468
Trre11g03436 1209 ProSitePatterns Protein kinases ATP-binding region signature. 933 958 IPR017441 GO:0005524
Trre11g03436 1209 MobiDBLite consensus disorder prediction 698 724 - -
Trre11g03436 1209 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 188 270 - -
Trre11g03436 1209 Coils Coil 244 264 - -
Trre11g03436 1209 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1015 1207 - -
Trre11g03436 1209 PRINTS Tyrosine kinase catalytic domain signature 1009 1022 IPR001245 GO:0004672|GO:0006468
Trre11g03436 1209 PRINTS Tyrosine kinase catalytic domain signature 1046 1064 IPR001245 GO:0004672|GO:0006468
Trre11g03436 1209 PRINTS Tyrosine kinase catalytic domain signature 1117 1139 IPR001245 GO:0004672|GO:0006468
Trre11g03436 1209 PRINTS Tyrosine kinase catalytic domain signature 1161 1183 IPR001245 GO:0004672|GO:0006468
Trre11g03436 1209 MobiDBLite consensus disorder prediction 661 682 - -
Trre11g03436 1209 PANTHER SERINE-THREONINE PROTEIN KINASE 227 1191 - -
Trre11g03436 1209 Gene3D Phosphorylase Kinase; domain 1 921 1014 - -
Trre11g03436 1209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1052 1064 IPR008271 GO:0004672|GO:0006468
Trre11g03436 1209 MobiDBLite consensus disorder prediction 129 162 - -
Trre11g03436 1209 Pfam PB1 domain 185 268 IPR000270 GO:0005515
Trre11g03436 1209 MobiDBLite consensus disorder prediction 24 44 - -
Trre11g03436 1209 MobiDBLite consensus disorder prediction 128 162 - -
Trre11g03436 1209 SUPERFAMILY Protein kinase-like (PK-like) 918 1189 IPR011009 -
Trre11g03436 1209 SUPERFAMILY CAD & PB1 domains 184 275 - -
Trre11g03436 1209 SMART PB1_new 183 268 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03436 Trre-Chr11 46824016 46829208 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03436 5 1209 MAP Kinase Kinase Kinase AT1G16270 46.651 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Trre11g03436 PK_Tyr_Ser-Thr 1.6e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03436 - - mtr:120578222 2120.89