Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03434 ATGGAGCCTAGAAATGAATACCAGCCGGGATTGCCGTCAGTAATGCATGATCATATGGATGACATTTATTCGAGTAGAAGACCACATGACCTCAATACAACAGAAGTTAAACCGGTGCAACATTACTCAATACAAACGGGCGAGGAATTCGCTCTTGAGTTTATGAGAGATAGAGCGAATCACGGTAAGCCTGTATTTCCGAATGTTGGTGATCCGAATTATGCAAGTGGTTATATGGAACTGAAAGGAATTTTAGGTATCAGTCACGCAGGATCTGAAACTGGATCAGACATTTCCATGCTATCAATGATGGAGAAATATCCTAAAGAGTTTGATAGAAGCCAGTATGGATCAATTCGATCAATACCAAGATCTTCACTGAATCAGGACAACAGACAGTTTGTGCATGGATATGGCTCTTCCGAAAGTTACGATAACTCATCAATCATGAAGTTCCTTTGCAGCTTCGGTGGTAGAATATTGCCACGGCCACGTGATGGAAAGCTAAGGTATGTTGGAGGCCAAACACGTATTCTCCGTATAAGAAAGGACATATCTTATCACGAGCTCATTCAGAAAGCATTGGTGATATATAACCAGATTCATACAATTAAGTATCAGCTTCCTGGTGAAGATCTCGATGCTTTGGTATCTGTGTCATCTGACGAGGATATACAGAATATGATGGAAGAATGTAATCATTTAGAAGATAGAGAAGGATCACAAAAACTTAGGATGTTTTTGTTCTCGATCAGTGATATGCAGGATGCTCAGTTTGGTCTCGGCTGCACAAGTGATGAATCTGAAATCCAATATGTTATTGCTGTTAATGGCATGGACTTGGAGTCAAGAAAAAACTCAACCATGGTCGGTTTCAGCTATTCTGCAAACGATATAAATGAATTGGACAGGCAAAATATTGACGGTGACAATGCTACCCTGACACACAATTTTGACTCGTCATTGGGTACTCATTTTTCGCAACCAGTGCTACCAACTTCCTCAAATTCATACGAAATGTATCCAATGTTTTATGGCGATCAAATGATGCGTCATGGTGAACCTATTGGTCATGATCAATATCTTATGCATCATGGTGTTGTTAATGCTTCTTATAAACCTCTTTTTGAGGAGACTCCTATTAATATGATTCCTCATATGCCAAATATTCAACGGGGGGGTTTAAATGAAGGCTATCTTCCTAGTGGAGTACAGGTACAAAATGCAGAAATACCAGAAACTTTGGTGAGAATGATGGCCGATAGTTCAATTCAACAAGAAACGATATCTCCGTCTCCTTCCCAACTGTTTGACGGTTACTCAAAAAATGATATTCCCAAAGCAACAGTTGCAGTTACTGCTGCAGAGGGATATTCATTGCCTCCAACAAGAACGAACCAGCTCCAGGATTATGAAGAGGCTTCTTCTACTTCCAGCAGTGCATTTGGTGCTGGTCCTTATGTTGATTCCCGCTCCAATGCAGTTGACTTGAGTAGTCTTCACCCTCCCCCTCTTCCTAAAAGAGTTTATTATTCAGAGAGAATTCCAAGGGAGCAAGTAGAGTCGTTGAACCGTTCTTCAAAGTCGGATGATGCGCACAATTCTCAGTTTCACGTTTCAGATTTACTTTCTGGTGTCAACTCGCAGAATTCAGCTATAGACCCTGGTAACAACTTGCACGATGGAAATCTGTCTAATCTTGCAGAGGAATCGAGCATCACAGCGAAGCCCTTGCATGCAGATGGCGAGGGAAACAAAGATATCTTAAATAAGGACAATGCTGTTATGTTGGAAACAGAAAATTGTTGTAACGATAACCATGAAAAATCCCCACTTGAAGGTAAATCAGGCATCCCTTTGAATGAATCAAACAATGATTTTAACGTGCAAGCAGTACCTGTTCCTTTGACTGCGAAAGTTGATTCAGAAGCACCAGGTGACATTCTTATTGATATTAATGATCGATTCCCTCGTGAATTGCTTAATGATATGTTCTCGAAAGCAATACTAGAAGAAGATTCCTCTGGTCAACATCCATTAGCTTCAGATGGAATGAGTTTAAGTATTAACATGGAAAACCATGAACCTAAAAGTTGGTCATATTTTCAAAAATTGGCGCAAGATGGGATCGGTAACGCGTCTCTTATTGACCAGGATCATCTTGGTTTTTCACCTGCTATAGTTGGAGATAATAGAGCTCAACATGTTACACCTTCAACAACTGATGAAGTTCCTCTAAACCGTGCAGAATTCCATCTCAATTTTGGTGAAGAAATTCAGAAAGACTTGCATGGAGAAAATGGAACTGAAACTACTGTCCAGCAATCTAATTATGATCAGTCACAAATTAATGACACTGAAAGTATGCAATTTGATGCTATGTTGGACAACCTTAGAGCACAAGATTCAGAATATGAGGATGGAAAGTTTGAAAAGAAAAATAACAGTCTACCTCCTCTTGACCCTTCTTTAGAAGAATTTGATATGAGTACCTTGCAGGTAATAATGAATGAAGATCTTGAAGAACTGAAGGAACTAGGTTCTGGTACCTTTGGAACTGTATTTCATGGAAAATGGCGAGGAACAGATGTTGCCATTAAGAGAATAAAGAAAACCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTGTTGAGTTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTTGTGGCATTTTATGGTGTGGTGCAGGATGGACCAGGAGGAACAATGGCAACCGTCACAGAGTATATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTCGATCGTCGCAAGAGACTGATAATTGCGATGGATGCAGCTTTTGGAATGGAATATTTGCACTCCAAAAATATTGTGCATTTCGATTTAAAATGTGACAATTTACTTGTAAACTTAAAAGATCCATTACGGCCAATATGCAAGGTTGGTGATTTTGGTTTGTCAAAAATTAAACGAAATACCTTGGTTTCTGGTGGGGTGCGAGGCACTCTACCTTGGATGGCACCAGAGCTGCTCAATGGTAGCAGCAGCAAGGTCTCAGAAAAGGTGGATGTGTTCTCCTTTGGCATAGTACTATGGGAGATTCTTACTGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGAATTGTTAACAACACACTAAGACCAACAATCCCAAATTATTGTGATATTGAATGGAGAACACTGATGGAGCAATGTTGGGCACCAAATCCTGCAGTTAGGCCATCCTTCACAGAAATAGCGAGCCGATTGCGCATTATGTCTTCGGCAGCTAGCCAAACCAAGTCACCGGGACACAAGGCATCCAAATGA 3369 0.4069 MEPRNEYQPGLPSVMHDHMDDIYSSRRPHDLNTTEVKPVQHYSIQTGEEFALEFMRDRANHGKPVFPNVGDPNYASGYMELKGILGISHAGSETGSDISMLSMMEKYPKEFDRSQYGSIRSIPRSSLNQDNRQFVHGYGSSESYDNSSIMKFLCSFGGRILPRPRDGKLRYVGGQTRILRIRKDISYHELIQKALVIYNQIHTIKYQLPGEDLDALVSVSSDEDIQNMMEECNHLEDREGSQKLRMFLFSISDMQDAQFGLGCTSDESEIQYVIAVNGMDLESRKNSTMVGFSYSANDINELDRQNIDGDNATLTHNFDSSLGTHFSQPVLPTSSNSYEMYPMFYGDQMMRHGEPIGHDQYLMHHGVVNASYKPLFEETPINMIPHMPNIQRGGLNEGYLPSGVQVQNAEIPETLVRMMADSSIQQETISPSPSQLFDGYSKNDIPKATVAVTAAEGYSLPPTRTNQLQDYEEASSTSSSAFGAGPYVDSRSNAVDLSSLHPPPLPKRVYYSERIPREQVESLNRSSKSDDAHNSQFHVSDLLSGVNSQNSAIDPGNNLHDGNLSNLAEESSITAKPLHADGEGNKDILNKDNAVMLETENCCNDNHEKSPLEGKSGIPLNESNNDFNVQAVPVPLTAKVDSEAPGDILIDINDRFPRELLNDMFSKAILEEDSSGQHPLASDGMSLSINMENHEPKSWSYFQKLAQDGIGNASLIDQDHLGFSPAIVGDNRAQHVTPSTTDEVPLNRAEFHLNFGEEIQKDLHGENGTETTVQQSNYDQSQINDTESMQFDAMLDNLRAQDSEYEDGKFEKKNNSLPPLDPSLEEFDMSTLQVIMNEDLEELKELGSGTFGTVFHGKWRGTDVAIKRIKKTCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPNYCDIEWRTLMEQCWAPNPAVRPSFTEIASRLRIMSSAASQTKSPGHKASK 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03434 1122 SUPERFAMILY CAD & PB1 domains 166 256 - -
Trre11g03434 1122 Pfam Protein tyrosine and serine/threonine kinase 841 1103 IPR001245 GO:0004672|GO:0006468
Trre11g03434 1122 PRINTS Tyrosine kinase catalytic domain signature 922 935 IPR001245 GO:0004672|GO:0006468
Trre11g03434 1122 PRINTS Tyrosine kinase catalytic domain signature 1030 1052 IPR001245 GO:0004672|GO:0006468
Trre11g03434 1122 PRINTS Tyrosine kinase catalytic domain signature 959 977 IPR001245 GO:0004672|GO:0006468
Trre11g03434 1122 PRINTS Tyrosine kinase catalytic domain signature 1074 1096 IPR001245 GO:0004672|GO:0006468
Trre11g03434 1122 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 928 1120 - -
Trre11g03434 1122 MobiDBLite consensus disorder prediction 493 513 - -
Trre11g03434 1122 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 169 251 - -
Trre11g03434 1122 SMART serkin_6 840 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g03434 1122 Pfam PB1 domain 165 249 IPR000270 GO:0005515
Trre11g03434 1122 ProSiteProfiles Protein kinase domain profile. 840 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g03434 1122 ProSitePatterns Protein kinases ATP-binding region signature. 846 871 IPR017441 GO:0005524
Trre11g03434 1122 CDD PB1_UP2 153 249 - -
Trre11g03434 1122 Gene3D Phosphorylase Kinase; domain 1 833 927 - -
Trre11g03434 1122 ProSitePatterns Serine/Threonine protein kinases active-site signature. 965 977 IPR008271 GO:0004672|GO:0006468
Trre11g03434 1122 Gene3D - 168 251 - -
Trre11g03434 1122 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 833 927 - -
Trre11g03434 1122 Gene3D Transferase(Phosphotransferase) domain 1 928 1121 - -
Trre11g03434 1122 MobiDBLite consensus disorder prediction 422 441 - -
Trre11g03434 1122 SMART PB1_new 164 251 IPR000270 GO:0005515
Trre11g03434 1122 PANTHER SERINE-THREONINE PROTEIN KINASE 199 1104 - -
Trre11g03434 1122 CDD STKc_MAP3K-like 846 1103 - -
Trre11g03434 1122 MobiDBLite consensus disorder prediction 422 439 - -
Trre11g03434 1122 SUPERFAMILY Protein kinase-like (PK-like) 827 1103 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03434 Trre-Chr11 46807235 46813412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03434 32 1122 MAP Kinase Kinase Kinase AT1G16270 48.505 0.0 969
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Trre11g03434 PK_Tyr_Ser-Thr 6.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03434 - - gmx:100801946 1607.42