Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03425 ATGGCTTCATCCCTTTTCACAAAGATTCTTTTAGGTCCTCGCTCGATTCACACTTCTTCCTTTCTCACTCACCACCCACCAATTCTCTCTTCTTTCTTCACTAAGCGGCTCTTTTCTGTACGAGCTGTTCCAACCTCTACAGCCCAAAACACCAAGTCGACTTGTTGGTCTCCTTGTATGGCTTCTTCAGTAGTTAGCAGAAGAGCTACATATTCAACGCGATCTGCACCTACAAATGAGCCAGTTGTTTCTGTGGATTGGCTTTACGATAACCTAAAGGAGCCTGATATTAAGGTGGTGGATGCCTCTTGGTACATGCCGGATGAGCAGAGGAATCCAATTCAAGAGTATCAGGTTGCTCACATTCCTGGGGCTCTTTTCTTTGATGTAGATGGAATAGCAGATCGAACAACAAATCTGCCACACATGTTGCCATCAGAGGAAGCTTTTGCAGCTGCTGTTTCTGCTCTTGGCATACAGAACAAAGATGACTTGGTGGTTTATGATGGCAAAGGATTATTTAGTGCAGCTCGTGTTTGGTGGATGTTCCGAGTGTTTGGGCATGACAGAGTTTGGGTATTAGATGGTGGCCTGCCAAGATGGCGTGCATCTGGTTATGATGTTGAATCTAGTGCTTCGAGTGATGCTATTCTTAAAGCCAGTGCTGCAAGTGAGGCAATAGAGAAAGTGTATCAGGGACAAGCAGTTGGTCCAATCACATTTGAGACTAAGTTTCAGCCACATCTTGTTTGGACCCTTGAACAGGTAACAAAAAATATAGAGGAAAAATCTCACCAACATGTAGATGCTCGAGGAAAGCCCAGGCCATAA 831 0.4465 MASSLFTKILLGPRSIHTSSFLTHHPPILSSFFTKRLFSVRAVPTSTAQNTKSTCWSPCMASSVVSRRATYSTRSAPTNEPVVSVDWLYDNLKEPDIKVVDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGIADRTTNLPHMLPSEEAFAAAVSALGIQNKDDLVVYDGKGLFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYQGQAVGPITFETKFQPHLVWTLEQVTKNIEEKSHQHVDARGKPRP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03425 276 PANTHER THIOSULFATE SULFERTANSFERASE 76 275 IPR045078 GO:0016783
Trre11g03425 276 ProSiteProfiles Rhodanese domain profile. 93 210 IPR001763 -
Trre11g03425 276 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 79 212 IPR036873 -
Trre11g03425 276 CDD TST_Repeat_1 82 205 - -
Trre11g03425 276 Pfam Rhodanese-like domain 84 203 IPR001763 -
Trre11g03425 276 SMART rhod_4 83 207 IPR001763 -
Trre11g03425 276 FunFam Sulfurtransferase 75 217 - -
Trre11g03425 276 Gene3D - 75 217 IPR036873 -
Trre11g03425 276 ProSitePatterns Rhodanese signature 1. 117 128 IPR001307 GO:0004792
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03425 Trre-Chr11 46734471 46744548 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03425 60 275 Sulfurtransferasese or Rhodanese AT1G79230 78.704 1.44e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03425 K01011 - gmx:100798053 488.419