Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03424 ATGGACAGAAAATTCTCTATTGGACGTTTGCTCTTACTCCTTAGCCTTACTTCACTTCTGGTTAAATCTTACTCATCTTCTAAACATGATCAAAAGACTTACATTGTCTACACCGGAAACATCAAAAATGATGAAACTTCTTCATTGTCTCGTTATGAAAACATGCTACAACAAGTTACAAAAAGCAATTCAACACCAAAAAGAGTCCTACACCATTACAAGCGTAGCTTTGTTGCAAACTTAACCGAGGAAGAAGCCGAAAAAATGGCTGGACTTGATGGAGTGGTATCGCTGTTTCCGAATGAAAAAATACAACTCCTTACTACACGGTCTTGGGATTTTATAGGATTTCCAGAATTTGTGGAGAGAGAACAAAGTGAATCTAATGTTATAATTGGAGTTTTGGATTCTGGCATTTGGCCAGAATCAAAAAGTTTTGATGATAAAGGATATAGTTCGCCACCGAGCAAATGGAAGGGTGTTTGTCAAGCTTCTTCTGATTTTTGCAACAACAAAATAGTTGGAGCAAGATATTACAATGATATCTTTGGAGAAGACTTCCTGAATAAAACTAGCATAGGTCCAAGGGACACGGTTGGGCATGGGACCCATGTTGCTTCCATAGCGGCCGGAAACCCAATCAGCAAGGCTAGTATGTTAGGCATGGGTGAAGGGACAACAAGAGGTGGTGCTTCATCCGCAAGAATTGCAGTTTATAAAGTCTGCTGGACTGAAGAATGTGACAGCGGGAGAATTCTCACTGCATTTAAGGATGCTATTGCTGATGGGGTAGACATACTGTCGGTCTCAATTGGAGGAAGGTATCTTAATAAGCAACATTTTACAGATGCATTCTCCGTTGGAGCTTTCCTGGCAATGAAGCATGGAATACTAACTGTATTCGCGGCGGGGAACAGAGGACCAGATCGTACATCCGTTCAGCACATTTCACCTTGGGCGATTTCTGTTGCGGCAAGCACGTTAGATAGAAAATTCGTTACAAAGGTCATATTAGGAGATGGCACAACTTATGAGGGCAACTCAATAAATACGTTTGACCTTAAAGGAAAATTGTATCCTTTAATCTACAGCGGGGATGCACCAAACAAGCAAGCAGGCTTCAATACAGATTCATCCAGAAATTGCTCAACCGGTTCGTTGGATCATAAATTGGTGAAAGGGAAAATTGTCCTATGCGAAGGAAGCATAGCAAGCGGCGAGGCAATCAGAGTAGGGGCAGTTGGTGTCTTGATGCAGGGTCACACTCATATGGATATTGCATACTCCTATCCCTTGTCTGCAAGTTATCTTCATACAAAGGATGCAAGGAAAGTACATAAATACATTCGATCTACGAGCACTCCAATGGCAACCATATTAAAGACAAATGAGTTCAAAGATAATTTGGCACCTGTAGTTGCGTCTTTCTCGTCGAGGGGTCCAAACAATGCAACACCTGAAATTCTAAAGCCGGATTTGATAGCTCCTGGAGTAGATATTGTCGCAAGTTGGTCCCCAATGGCTCTAATTTCTAACTCCTCTGGCGAGAAAAGAAAATTGATGTACAACATTATATCAGGCACTTCCATGGCATGCCCTCATGTATCTGGAGCAGCGGCCTACATTAAAACTTTTCACCCTGAATGGTCTCCGGCTGCTCTTCGGTCTGCTTTAATGACAACCGCAAAGCAGATAAGTCCAGATGGAGCTGCAGAATTTGCCTATGGGGCGGGTCAAATCGATCCTATCAAGGCTTTAGAACCAGGCTTAATATATGAGACAAATGAAGTTGACTACATTAGGTTTTTATGTGGTCAAGGTTTCAATGCATCAATTTTGAAGCTCATCACAGAGGAATATGTCAATTGCTCTGAGATAGGATATATAAGCGCAACAGATTTAAACTATCCGTCATTTGCTTTCAAAGCCCCGCGTCCCAAACATCCTTTAAGTGGAAGCTTCAAAAGAACCGTTACAAATGTGGGACTATCAACTTCTACTTACAAAGCAATCATAAGAGCTCCTAAAGGACTCCATGTTTCGGTGAATCCAAATGTATTGCCTTTCACTTCGTTAGGAGAAAAGCAAACATTTGTTCTCACCGTGCATGGAAAATTGAAGGGATCTATTGGTTCAGCTTCATTGGTCTGGGACGATGGAACATTTCAAGTCCGGAGCCCTATTGTTGTATTTGATGAAAGGGCTGAAAAAGGAAAGGGCATAAATTTGTATAGTTTAAATTACATGTTCATTGTAATGTTAAACTTACTATTTTATATTGTTATTATTGAATAA 2295 0.4087 MDRKFSIGRLLLLLSLTSLLVKSYSSSKHDQKTYIVYTGNIKNDETSSLSRYENMLQQVTKSNSTPKRVLHHYKRSFVANLTEEEAEKMAGLDGVVSLFPNEKIQLLTTRSWDFIGFPEFVEREQSESNVIIGVLDSGIWPESKSFDDKGYSSPPSKWKGVCQASSDFCNNKIVGARYYNDIFGEDFLNKTSIGPRDTVGHGTHVASIAAGNPISKASMLGMGEGTTRGGASSARIAVYKVCWTEECDSGRILTAFKDAIADGVDILSVSIGGRYLNKQHFTDAFSVGAFLAMKHGILTVFAAGNRGPDRTSVQHISPWAISVAASTLDRKFVTKVILGDGTTYEGNSINTFDLKGKLYPLIYSGDAPNKQAGFNTDSSRNCSTGSLDHKLVKGKIVLCEGSIASGEAIRVGAVGVLMQGHTHMDIAYSYPLSASYLHTKDARKVHKYIRSTSTPMATILKTNEFKDNLAPVVASFSSRGPNNATPEILKPDLIAPGVDIVASWSPMALISNSSGEKRKLMYNIISGTSMACPHVSGAAAYIKTFHPEWSPAALRSALMTTAKQISPDGAAEFAYGAGQIDPIKALEPGLIYETNEVDYIRFLCGQGFNASILKLITEEYVNCSEIGYISATDLNYPSFAFKAPRPKHPLSGSFKRTVTNVGLSTSTYKAIIRAPKGLHVSVNPNVLPFTSLGEKQTFVLTVHGKLKGSIGSASLVWDDGTFQVRSPIVVFDERAEKGKGINLYSLNYMFIVMLNLLFYIVIIE 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03424 764 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Trre11g03424 764 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Trre11g03424 764 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Trre11g03424 764 CDD Peptidases_S8_3 105 562 IPR034197 -
Trre11g03424 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 730 IPR045051 -
Trre11g03424 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 527 537 IPR023828 -
Trre11g03424 764 Gene3D - 329 466 - -
Trre11g03424 764 ProSitePatterns Serine proteases, subtilase family, histidine active site. 201 211 IPR022398 -
Trre11g03424 764 Pfam Peptidase inhibitor I9 33 106 IPR010259 -
Trre11g03424 764 CDD PA_subtilisin_like 336 459 - -
Trre11g03424 764 Gene3D Peptidase S8/S53 domain 129 599 IPR036852 GO:0004252|GO:0006508
Trre11g03424 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 106 IPR037045 -
Trre11g03424 764 Gene3D - 603 732 - -
Trre11g03424 764 SUPERFAMILY Subtilisin-like 106 590 IPR036852 GO:0004252|GO:0006508
Trre11g03424 764 ProSiteProfiles Serine proteases, subtilase domain profile. 111 586 - -
Trre11g03424 764 FunFam Subtilisin-like protease SBT1.5 129 341 - -
Trre11g03424 764 Pfam Subtilase family 128 578 IPR000209 GO:0006508|GO:0008236
Trre11g03424 764 Pfam Fibronectin type-III domain 633 730 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03424 Trre-Chr11 46712862 46716823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03424 25 731 Subtilisin-like Serine Gene Family AT5G59120 46.058 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03424 - - cam:101506276 989.949