Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03398 ATGGTAGCACCAAGACCAAACACATTTATGCCGTTTGGAAACGGAGTCCACTCTTGTCCAGGAAGTGAAATGGCTAAGCCTCAGGAATATGTGCATGGCAATCAATTAAGAGGTTCTATTGTTAATAAGATGATTAAATTTGTGTTATCTGTAGGAATCTCTCTGCTAACAACTTCAAGGGGAATATACCGGTTGAGTTGGGTCACATCGTTAATCTTGGGACCTATCTAG 231 0.4069 MVAPRPNTFMPFGNGVHSCPGSEMAKPQEYVHGNQLRGSIVNKMIKFVLSVGISLLTTSRGIYRLSWVTSLILGPI 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03398 76 SUPERFAMILY Cytochrome P450 5 28 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g03398 76 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 12 21 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03398 Trre-Chr11 46274544 46275170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03398 2 26 Cytochrome P450 AT5G45340 80.000 2.94e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03398 K09843 - thj:104800678 57.7658