Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03394 ATGAGGAGTTTCTTCAACCCTTGGATAATGCTTGCATTGGTAGTACTTCTTCCCGTTCTTCTCTCTCTCAGAAATCCTCGTGGTGAACCAGAGAATCTCATTACACAAACAACCACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCATACTTCTTTCTCTGGTACTTCTTTTGCTACTGTGAAGTTAGCAAATACTTTTCCATTTGAGTTCAATCTCAAAATCAGAGATGGTTCCAATCTTCAGTATGATTTCTACAGAGATTCTTGTTCTCAAGCTGAGGATATTATTCGTTCTTCAGTTGCTGATATTTTCTTTGATCATAGAACGTTTGCTGCTTCTATTCTTCGTCTCTTCTTTCATGATTGCTTCATCCAGGGCTGTGATGCTTCACTGCTGTTGGAGGATAGAAACAGTTCTTCTGAGAAGCAGGCTATTCCAAATCAGACATTGAAAGGTTTTGACAAAATTGACTTGATTAAGGAGGAAGTGGAACAAGCTTGTCCTGGCGTCGTGTCTTGTGCTGACATACTTGCTCTTGCAGCAAGAGATGCTGTTCTTTTGGCTGGTGGACCTTTCTATCCAGTTTTAACCGGCAGACGAGATAGCCGTCAATCGTATTTTCAGGAAGCAACTGATCAAATTCCAAGACCTGATGATAATGTTACGCGCACACTTCAACTCTTCAATCTTAGAGGATTCAATGCCCGGGAGACAGTCAGCCTTCTTGGAGCACACAACATCGGACAAATCGGCTGTGATTTCATTCAGCAAAGGCTATACAACTTTCAAGGAACAAGACAACCAGACCCGAGTATACCTCTTGATTTCCTTAATGATATGAGGCGAAATTGTCCACCAGACACCAAGAATACCAGTACCAACAGCAGCACAAACAAGTTTTCGACGTTTACGATTTCAAAGCCAATGAATGTTCATCACTCTGAAAAGAAAGGGATGTCATACATGCAAGCACTGTCATCTGCAATATCATCCGGAAAATCATTTGACACTCACTACTACCAGAGCTTGTTGCAAGGAAGAGGGTTACTGTTTGCTGATCAACAGCTTATGGCTCAAGAGAAGACTGCAAGATTGGTTTCTGCTTATGCTTCCGACGATGGATCAACCTTTCGGATGGATTTCGCTGCGGTTATGTTGAAATTGTCTAATCTTGATGTCTTGACTGGAAACCAAGGCGAGGTTCGTCTGAATTGTTCCCAACTCAGAAATTCTTAA 1248 0.4151 MRSFFNPWIMLALVVLLPVLLSLRNPRGEPENLITQTTTSSSSSSSSSSSSSHTSFSGTSFATVKLANTFPFEFNLKIRDGSNLQYDFYRDSCSQAEDIIRSSVADIFFDHRTFAASILRLFFHDCFIQGCDASLLLEDRNSSSEKQAIPNQTLKGFDKIDLIKEEVEQACPGVVSCADILALAARDAVLLAGGPFYPVLTGRRDSRQSYFQEATDQIPRPDDNVTRTLQLFNLRGFNARETVSLLGAHNIGQIGCDFIQQRLYNFQGTRQPDPSIPLDFLNDMRRNCPPDTKNTSTNSSTNKFSTFTISKPMNVHHSEKKGMSYMQALSSAISSGKSFDTHYYQSLLQGRGLLFADQQLMAQEKTARLVSAYASDDGSTFRMDFAAVMLKLSNLDVLTGNQGEVRLNCSQLRNS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03394 415 PRINTS Plant peroxidase signature 117 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 PRINTS Plant peroxidase signature 240 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 PRINTS Plant peroxidase signature 346 363 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 PRINTS Plant peroxidase signature 193 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 PRINTS Plant peroxidase signature 387 400 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 PRINTS Plant peroxidase signature 155 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 PRINTS Plant peroxidase signature 93 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 PRINTS Plant peroxidase signature 174 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 PRINTS Plant peroxidase signature 330 345 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 CDD secretory_peroxidase 83 410 IPR033905 GO:0004601|GO:0042744
Trre11g03394 415 Pfam Peroxidase 101 376 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 SUPERFAMILY Heme-dependent peroxidases 83 411 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 MobiDBLite consensus disorder prediction 31 53 - -
Trre11g03394 415 ProSiteProfiles Plant heme peroxidase family profile. 83 413 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 PRINTS Haem peroxidase superfamily signature 193 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 PRINTS Haem peroxidase superfamily signature 115 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 PRINTS Haem peroxidase superfamily signature 332 347 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 PRINTS Haem peroxidase superfamily signature 175 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 PANTHER PEROXIDASE 25-RELATED 63 401 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g03394 415 Gene3D - 87 411 - -
Trre11g03394 415 FunFam Peroxidase 87 230 - -
Trre11g03394 415 ProSitePatterns Peroxidases active site signature. 115 126 IPR019794 GO:0004601
Trre11g03394 415 Gene3D Peroxidase, domain 2 219 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03394 Trre-Chr11 46060460 46063227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03394 80 411 Peroxidase AT4G33870 46.939 2.02e-100 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03394 K00430 - gmx:100804973 551.206