Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03366 ATGGTACAATCTACAGATGACATATCCAATGAACTCTCCATTGGGAAACAAAGCCCTCATGAAGAATCAAGTAGCATTTTAATGGACAAAACAGTTCCCTCCAGGTTGATTGACAACATTGCTGCTACTAGAATTCAAAATGCATTTCGTTCATTTATGGCAAGAAGAACATTTCAAAATCTAAGCAGAGCAGAGAAATTTGACGCGTTAATTCAAGATCATATGGCCACAGACCAAACAGCAACTACACTTAACTACATACATTCATGGAGCAGAATACAAGATGAAATTAGAGCTCGCAGAATCTGTATGATAACAGCAGCCAGGATTAAGCAAAGGAGGTTGGAAAGCCAGTTGAAAGTTGAGGCTAAGATTAACGAGCTAGAGACGGAATGGTGCAGTGGTTCTGAAACAATGGAAGAGATACTTTCAAGGATACATCAGCGAGAAGAAGCAGCAATTAAACGAGAGAGAGCCATGGCATATGCTTTCTCTCATCAGTGGAGGCCAAACTGTAACCAGTATTTTGGTCAGGCTTCTTATAGCCTTGGTAAAGAAAGCTGGGGTTGGAGCTGGATGGAGCGTTGGGTTGCAGCGCGTCCTTGGGAAGTTCGGGTTCAAGCTGAGTCCCCCAAAACAAAGAAACTCAACGGCCAACAGAAAAACACCAAATTAGATGAGACGAACCATAATGGAACCAAATCACCATTGGCTAAAGCTGCCCAGTTAGATAAGGTGAACCATAATGAAACCAAATCACCATTGGCTAAAGCTGCCCTGTCAAATGGGAAGGAGACTGATAAAGGAAAGAAAAACAAAACTTGA 825 0.4194 MVQSTDDISNELSIGKQSPHEESSSILMDKTVPSRLIDNIAATRIQNAFRSFMARRTFQNLSRAEKFDALIQDHMATDQTATTLNYIHSWSRIQDEIRARRICMITAARIKQRRLESQLKVEAKINELETEWCSGSETMEEILSRIHQREEAAIKRERAMAYAFSHQWRPNCNQYFGQASYSLGKESWGWSWMERWVAARPWEVRVQAESPKTKKLNGQQKNTKLDETNHNGTKSPLAKAAQLDKVNHNETKSPLAKAALSNGKETDKGKKNKT 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03366 274 ProSiteProfiles IQ motif profile. 38 66 IPR000048 GO:0005515
Trre11g03366 274 MobiDBLite consensus disorder prediction 212 236 - -
Trre11g03366 274 PANTHER IQ-DOMAIN 5-RELATED 38 231 - -
Trre11g03366 274 MobiDBLite consensus disorder prediction 207 274 - -
Trre11g03366 274 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03366 Trre-Chr11 45731922 45734541 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03366 34 208 IQD Protein Family AT3G15050 61.143 2.96e-81 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03366 - - mtr:25487263 446.047