Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03345 ATGGCAAGTGCAAATGTAGTTGTTGGTGTTGGTGAAGAAGCAGAAGAAAACAATAATAAGCTGATTCTGTATTCATTTTGGAGGAGTTCATGTTCCTTCCGAGTCCGAATTGCTCTCAACTTCAAAGGCCTCAAATATGACTACAAACCTGTCAATCTCTGGAAGGGAGAACAATCTCATCCTGAGTTTCTCCAGCTCAACCCTGTTGGTTTTGTTCCTGTTCTCGTCGATGGCCCTGTTGTAATTTCCAACTCTTTCGCCATTATTATGTATTTGGAGGATAAGTATCCTCAACATCCTTTGCTCCCTACTGATATTCATAAAAGAGCAATCAATTTCCAGGCTGTCAGTATTGTTTCTTCATCAATACAACCTCTTCAAAACGGAAGTCTCCTGAAGTACATAGAGGGAAAAGCTGGCCCCGATGAAAAACTTTTATGGGTCCAGAGTGTAATTGAAAAAGGCTTCACAGCTCTTGAAAAGCTATTGAAAGAACACACTGGGAGGTATGCTACTGGAGATGAAGTTTTCATGGCGGATATATTTTTAGCGCCTCAGATACACTCCGCATTTAAGAAATTCAACATTGACATGAATGAGTTCCCAACGCTATCAAGATTACACGAGACATATTATGAGATCCCAGCATTCCGGGAGGCTTTGCCAGAGAATCAGCCAGATGCACCAGGCTAG 693 0.417 MASANVVVGVGEEAEENNNKLILYSFWRSSCSFRVRIALNFKGLKYDYKPVNLWKGEQSHPEFLQLNPVGFVPVLVDGPVVISNSFAIIMYLEDKYPQHPLLPTDIHKRAINFQAVSIVSSSIQPLQNGSLLKYIEGKAGPDEKLLWVQSVIEKGFTALEKLLKEHTGRYATGDEVFMADIFLAPQIHSAFKKFNIDMNEFPTLSRLHETYYEIPAFREALPENQPDAPG 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03345 230 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 105 230 IPR010987 -
Trre11g03345 230 FunFam Glutathione S-transferase Z1 19 103 - -
Trre11g03345 230 NCBIfam maleylacetoacetate isomerase 22 228 IPR005955 GO:0003824|GO:0005737|GO:0009072
Trre11g03345 230 Pfam Glutathione S-transferase, C-terminal domain 144 218 IPR004046 -
Trre11g03345 230 FunFam Maleylacetoacetate isomerase 104 230 - -
Trre11g03345 230 SUPERFAMILY GST C-terminal domain-like 100 229 IPR036282 -
Trre11g03345 230 CDD GST_N_Zeta 21 93 IPR034333 -
Trre11g03345 230 Gene3D Glutaredoxin 18 103 - -
Trre11g03345 230 SUPERFAMILY Thioredoxin-like 18 103 IPR036249 -
Trre11g03345 230 SFLD Glutathione Transferase (cytosolic) 22 210 IPR040079 -
Trre11g03345 230 Pfam Glutathione S-transferase, N-terminal domain 20 93 IPR004045 -
Trre11g03345 230 PANTHER MALEYLACETOACETATE ISOMERASE 21 228 - -
Trre11g03345 230 CDD GST_C_Zeta 107 225 IPR034330 -
Trre11g03345 230 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 19 100 IPR004045 -
Trre11g03345 230 SFLD Main (cytGST) 22 210 - -
Trre11g03345 230 Gene3D - 104 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03345 Trre-Chr11 45502262 45504424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03345 20 230 Glutathione S-transferase Gene Family AT2G02380 63.033 2.23e-100 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03345 K01800 - gmx:547590 338.961