Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03311 ATGGAAAAGAAATCACTTGCTGCCTTGTCCTTCCTCTTTCTCGTTCTCTTTGTTGCACAAGAAATTGTGGTGACTGAGGCCAAAACATGTGAGAATTTGGCCGGCAAATACAAGGGAGTATGCTTTGGTGGGTGCGACGGTCACTGCAAAAAACAAGAGGGTGCCATTAGCGGCAGGTGCAGGGATGACTTTCGTTGTTGGTGCACTAAACATTGTTAA 219 0.4612 MEKKSLAALSFLFLVLFVAQEIVVTEAKTCENLAGKYKGVCFGGCDGHCKKQEGAISGRCRDDFRCWCTKHC 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03311 72 SMART gth_4 29 72 IPR003614 GO:0006952
Trre11g03311 72 Pfam Gamma-thionin family 28 72 - -
Trre11g03311 72 Gene3D - 28 72 IPR036574 -
Trre11g03311 72 SUPERFAMILY Scorpion toxin-like 27 72 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03311 Trre-Chr11 45145407 45146280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03311 1 72 Plant Defensins Gene Families AT5G63660 39.474 2.01e-08 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03311 - - gmx:100779239 112.079