Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03310 ATGGAGAAGAAATCAATTGCTGCCTTGTCCTTCCTCTTCCTCGTTCTCTTTGTTGCACAAGAAATTGTAGTGACTGAGGCACAAAACAAATGTGAGCACTTGGCTGATACATATAGAGGACCATGCTTCACTGATGCTAGCTGTGATGATCACTGCAAGAATAAAGAGCATTTTCGTAGTGGCACTTGCCATGGCTTTCGTTGTTGGTGCACTCATCAAAACTGTTAA 228 0.4254 MEKKSIAALSFLFLVLFVAQEIVVTEAQNKCEHLADTYRGPCFTDASCDDHCKNKEHFRSGTCHGFRCWCTHQNC 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03310 75 Gene3D - 29 75 IPR036574 -
Trre11g03310 75 SMART gth_4 30 74 IPR003614 GO:0006952
Trre11g03310 75 SUPERFAMILY Scorpion toxin-like 30 72 IPR036574 -
Trre11g03310 75 CDD Knot1 40 71 IPR003614 GO:0006952
Trre11g03310 75 Pfam Gamma-thionin family 31 72 - -
Trre11g03310 75 PANTHER DEFENSIN-LIKE PROTEIN 1 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03310 Trre-Chr11 45141517 45142642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03310 7 73 Plant Defensins Gene Families AT1G61070 37.681 3.44e-10 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03310 - K00473 gmx:100779239 114.005