Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03271 ATGTTACGCAGAGTTTACGCTGTGTTGCTTTGTTTCATTGCCCTTTCTTTATCGAACTTTTATCAATCAATGATCGCTCCTTCAATCTTCTCCTTTTCTACGATTGATATGCTATCAGGGGTGGATGCACATAGAGGAACACTGTGGCTGTCTTATGGGCTTTGGCTTACGGTAGATATATCAGGTGTTTTTTTGGAATCTTCTTTTACTAACCTGAGGTTATGTTGCTTAAATTATGCTTGTAAATCTATATTAAAGAGGAAGCTTGTTTCTAAAGCTGATAGAGAAGATATTAAGAGAGAGATTCAGATTTTGCAGCATTTATCTGGCCAACCAAACATTGTTGAATTCAAAGGTGCTTATGAGGATAGAATCATTGCTCAGGGTCATTATTCAGAGAGACCTGCTGCTTCCATTTGTAGAGATGTTGTTAATGTTGTGCATATTTGTCATTTCATGGGTGTATTGCATCACGATTTAAAACCGGAGCATTTCTTGCTTTCTAGTAAAGATGAAGGAGCAGCACTCAAAGCTACTGATTTTGGACTTTCTGTTTTCATTGAAGAAGGCAGGCAGTACACCCTCTTTGGATATGTAGCATATAAACCTTTTGCGATGACTGATGACAGTACTTCTGACAGTTCTTATGACAAAAAGAGGGCTTTGTATGATCAATACGGAGAGGCAAGAGTTAAGAGTTCAGTGGGCGTTAGGATCAAGTGCCTATGCGGAGAATTACAGACAAATCCATTTGATTTATTTGAGAGATTTTTTGGGCCAAGTATGGGCGGCTTTGCTGGCATGGATCCAACTGGTTTTGGCACACGGCGTCATAGTACTGTTACTAAGGGTGAAGACATCCGGTACTTTGTTTGTCCTTGTAGGACCAACTGTCAATATGAGGGGACATTCATAGCTAAGAGACTATTCGAGGGATTGTCTTGA 945 0.3979 MLRRVYAVLLCFIALSLSNFYQSMIAPSIFSFSTIDMLSGVDAHRGTLWLSYGLWLTVDISGVFLESSFTNLRLCCLNYACKSILKRKLVSKADREDIKREIQILQHLSGQPNIVEFKGAYEDRIIAQGHYSERPAASICRDVVNVVHICHFMGVLHHDLKPEHFLLSSKDEGAALKATDFGLSVFIEEGRQYTLFGYVAYKPFAMTDDSTSDSSYDKKRALYDQYGEARVKSSVGVRIKCLCGELQTNPFDLFERFFGPSMGGFAGMDPTGFGTRRHSTVTKGEDIRYFVCPCRTNCQYEGTFIAKRLFEGLS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03271 314 Gene3D Transferase(Phosphotransferase) domain 1 123 237 - -
Trre11g03271 314 PANTHER SERINE/THREONINE-PROTEIN KINASE 67 199 - -
Trre11g03271 314 ProSiteProfiles Protein kinase domain profile. 21 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g03271 314 SUPERFAMILY Protein kinase-like (PK-like) 78 201 IPR011009 -
Trre11g03271 314 Gene3D Phosphorylase Kinase; domain 1 75 122 - -
Trre11g03271 314 SMART serkin_6 69 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g03271 314 Pfam Protein kinase domain 123 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03271 Trre-Chr11 44719801 44730567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03271 74 193 EF-hand Containing Proteins AT3G20410 67.133 3.96e-58 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trre11g03271 Pkinase 7.9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03271 K13412 - gmx:100812843 196.823