Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03264 ATGAAGCTTCATAAATATATTTGCTTATTCTTGGTTCTCTTTAGTATAATTTCAAGCTCACAAGCCTATACATTCTATGTTGGTGGAAAAGATGGATGGGTTTTGAACCCCTATCAAAGTTACAATGAATGGACGGGGAAGAATAGGTTCCAAGTCAATGATATTCTTGTTTTTAAGTACAAGAAGGACTCAAATTCAGTGTTGGTGGTGACCAAAGAGGATTATGATAAGTGCAACAAGAAGAATCCAATCAAGAAATTTGATGATGGTGATTCTGAGTTCCAATTGGATAGATCAGGTCCATTTTATTTCATTAGTGGAAAAGATGATAATTGTGAAAAAGGTCAGAAATTAATTGTTGTGGTTTTGGCTGTGAGAAAAATATCTCCTCCCTATGTTCCAATTACTCCACCAAATGTTCCTTATACACCTCCCAAAAGTACTCCTTCACCCGGCAATCAACCTCCGCATATTCCAATTACACCTCCGGTTCACAATCCTCCTAGTGTTCCTTATACACCTCCAAAAACACCTCCTAAAAATGAGCCACCATATGTACCAATAATAACACCACCAAAAACTTCATCCCCTCCTAACATCCCTCCCAGTGTTCCATACAATCCACCAAAAGTTCCTTCTCCTGGGAAAGAGCCACCATATGTATCAATTACACCACCAAAAACACCTTCGCCTATTCACACCCCTCCTAGTGTTCCATACACTCCACCAAAAACTCCTCCTGGGAATGAGCCACCATATGTACCAATTACACCACCAAAAACACCTTCGCCTATTTACACCCCTCCTAATGTTCCATATACTCCTCATATTCACACCCCTCCTAGTGTTCCATATACTCCACCGAAAGCTCCTTCTCCTGGGAATGAATCACCGTATGTACCAATTACACCACCAAAAACACCTCCTATTCACACCCCTCCTACTCCTACTGTTCCTTATTCTCCACCAAAAGCTCCTTCTCCTGGAAACAAACCACCATATGTACCAATAATAACACCACCGAAAACTCCTTCTCCTATTCACACCCCTCCTAGTGTTCCATACACTCCACCAAAAGGTCCTTCTCCTGGGAATGAACCACCGTATGAACCAATTACACCACCAAAAACACCTTCTCCTATTCAAAGCCCTCCTAGTGTTCCATATACTCCTCCAAATAATCCTCCTACTTATACCCCTCCTAGTGTTCCTTATACTCCACCAGAAGCACCTTCTCATGGGAACCAACCACCGTATGTTCCAATTACACCACCAAAAACACCTTCTCCAATTTACACCCCTCCTAGTGTTCCTTATACTCCCCCAACAACACCTTCTCATGGGAACCAACCACCGTATGTACCAATTACACCACCAAAAACACCTTCTCCTATTCACACCCCTCCTAGTATTCCTTATACTCCTCCAAAAACACCTTCTCCTGGTAATCAACCACCATATGTACCAATTACACCTCCTAAAACACCTTCTCCTAATCACACCCCTCCTAATGTCCCATATACTCCCCCAAAAGCACATTCTCCTGGGAACCAACCACCGTATGTACCAATTACACCACCAAACATACCTTCTCCTAGTGTTCCTTATACTCCTCCAAAAACACCTTCTCCTGGTAATCAACCACCATATGTACCAATTACACCTCCAAAAACACCATCTCCTATTCACACTCCTCCTAATGTTCCTTATACTCCTCCAAAAACTCCTTCTCCAAGAAATGAACCACCTTATGTACCAATTACACCTCCAAAAAATCCTTCTCCTATTCACACCCCTCCTAGTGTTCCTTATACTCCACCAAAAGCTCCAGCTCCTGGAAACGAGCCACCATATGTACCAATTACTCCATCTCCTATTCACACTCCTCCTAATGTTCCTTATACCCCACCAAAAACTCCTTCTCCTAACAATCAACCACCCTATGTACCAGTTACACCACCAAAAACCGTCTCTCCTATACACGCCCCTCCTAATGTTCCTTATACTCCTCCAGAAGCTCCTGCCCCTAAAAATCAACCACCTTATGTTCCAATTCCATCTCCAAAAACTCCTTCCCCTACTTCTCATCCTACTCCACCTAGTATTGCTCCTTACACTCCCCCTGAAACTCCATCCCCTAAAAATCAGCCACCTTACGTACCGATTACACCACCAAAATCTCCTTCTCCTATTCAAACCCCTCCTAATGTTCCCTACACACCTCCAACAACTCCTTCCCCTAGCAATCACCCTCCAAATGTTCCAACAACACCCTCTCCTATTTCTCCACCTCCATATGTTCCAACACCTCCAAAAACACCTTCTCCGATTTCTCAAGCACCTTACATTGTAACACCTCCCAACAATCCAATAGCTCCTTCCCCAAGCAATAACCCCCCTAATGTACCAAAACCTCCAAAAACACCTCCTATTTCTCAACCTCCATATGTACCAACACCTCCAAAAACTCCTTCTCCAATTTCTCAAGCCCCTTACATTCAAACACCACCAAACACGCCTTCACCAACATCACAACCACCATACACTCAAACTCCTCGAAGCACTCCTTCTTCACCAACATCGCAACCACCTTACATTTCAACACCTCCAGAGAGTACTCCTTCTCCATTTTCTCACACACCTCGAGGTGCTCTTTCTCCAATTTCACAACCTCCATATATCCAAGCACCACCAAACTCTCATTCACCAACATCTCAACCACCTTACAGTCAAACTCCACCAACCACCTCTTCCCCGTCATCTTCTCCATCATCAGCACAAACTCCTTCCGGAAGTGGAATATCACCATCTCCACTATCTCCATATCCATCCAACAACTCAACATCACCTTCAACTTCACCTTCGGCGAGTTCACCGTCGTCAACCACTACTTCACCTCCGACTCTCACTCCTGCGAGTTCTCCGGCGTCAACCACTACTTCACCTCCAACTCTTACTCCAACGGGTTCTCCAGTGTCAGCCACTACTCCAACAATATCTCCTGTGGGGTCTCCTCTGACAGCATCAACTCCATCACCATCATCAACTGTTCCTGGAACACCAGAAAGTCTATCACCATCGTCCACCCCTTCAGGAACACCTTCTGCATCGAATGAAACGTCAGCGGGGCGGACAACAAGCGGAGTATCGTCTGCAAATCCATGGGGGATATGGACTTACTCTATTACGATTTTGGTCGGTGCTGCACTCACTAGTACTATTCTTGGATAG 3231 0.4444 MKLHKYICLFLVLFSIISSSQAYTFYVGGKDGWVLNPYQSYNEWTGKNRFQVNDILVFKYKKDSNSVLVVTKEDYDKCNKKNPIKKFDDGDSEFQLDRSGPFYFISGKDDNCEKGQKLIVVVLAVRKISPPYVPITPPNVPYTPPKSTPSPGNQPPHIPITPPVHNPPSVPYTPPKTPPKNEPPYVPIITPPKTSSPPNIPPSVPYNPPKVPSPGKEPPYVSITPPKTPSPIHTPPSVPYTPPKTPPGNEPPYVPITPPKTPSPIYTPPNVPYTPHIHTPPSVPYTPPKAPSPGNESPYVPITPPKTPPIHTPPTPTVPYSPPKAPSPGNKPPYVPIITPPKTPSPIHTPPSVPYTPPKGPSPGNEPPYEPITPPKTPSPIQSPPSVPYTPPNNPPTYTPPSVPYTPPEAPSHGNQPPYVPITPPKTPSPIYTPPSVPYTPPTTPSHGNQPPYVPITPPKTPSPIHTPPSIPYTPPKTPSPGNQPPYVPITPPKTPSPNHTPPNVPYTPPKAHSPGNQPPYVPITPPNIPSPSVPYTPPKTPSPGNQPPYVPITPPKTPSPIHTPPNVPYTPPKTPSPRNEPPYVPITPPKNPSPIHTPPSVPYTPPKAPAPGNEPPYVPITPSPIHTPPNVPYTPPKTPSPNNQPPYVPVTPPKTVSPIHAPPNVPYTPPEAPAPKNQPPYVPIPSPKTPSPTSHPTPPSIAPYTPPETPSPKNQPPYVPITPPKSPSPIQTPPNVPYTPPTTPSPSNHPPNVPTTPSPISPPPYVPTPPKTPSPISQAPYIVTPPNNPIAPSPSNNPPNVPKPPKTPPISQPPYVPTPPKTPSPISQAPYIQTPPNTPSPTSQPPYTQTPRSTPSSPTSQPPYISTPPESTPSPFSHTPRGALSPISQPPYIQAPPNSHSPTSQPPYSQTPPTTSSPSSSPSSAQTPSGSGISPSPLSPYPSNNSTSPSTSPSASSPSSTTTSPPTLTPASSPASTTTSPPTLTPTGSPVSATTPTISPVGSPLTASTPSPSSTVPGTPESLSPSSTPSGTPSASNETSAGRTTSGVSSANPWGIWTYSITILVGAALTSTILG 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03264 1076 CDD OsENODL1_like 23 123 IPR041846 -
Trre11g03264 1076 MobiDBLite consensus disorder prediction 891 914 - -
Trre11g03264 1076 Pfam Plastocyanin-like domain 34 116 IPR003245 GO:0009055
Trre11g03264 1076 MobiDBLite consensus disorder prediction 134 1052 - -
Trre11g03264 1076 MobiDBLite consensus disorder prediction 134 876 - -
Trre11g03264 1076 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Trre11g03264 1076 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Trre11g03264 1076 MobiDBLite consensus disorder prediction 915 1052 - -
Trre11g03264 1076 PRINTS Atrophin signature 990 1011 IPR017993 -
Trre11g03264 1076 PRINTS Atrophin signature 319 347 IPR017993 -
Trre11g03264 1076 PRINTS Atrophin signature 392 412 IPR017993 -
Trre11g03264 1076 PRINTS Atrophin signature 671 692 IPR017993 -
Trre11g03264 1076 FunFam Early nodulin-like protein 1 22 127 - -
Trre11g03264 1076 PANTHER BLUE COPPER PROTEIN 22 165 IPR039391 GO:0009055
Trre11g03264 1076 Gene3D - 21 126 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03264 Trre-Chr11 44516270 44519609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03264 3 126 Phytocyanin Superfamily AT5G53870 57.031 7.60e-51 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03264 - - tpra:123895145 587.415