Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03251 ATGGCTGCTAGAGACATCCTTCATAAGATGAAGGAAAAAGTTGGGTTTGGTTTATCCGACCCAGATTCAGGTAAAGGAAAGAGCAAGATGTCGAAACACATAACTCATGGATTTCACTTGGTAAAAGGAAGATCATATCATGAAATGGAGGATTATCTTGTTGCAAGATTTAAGCAAATTGATAACCATGAATTAGGCTTGTTTGCAATATTTGATGGCCATGCTGGTCACAATGTACCTAACTACTTGCAGTCTCATTTGTTTGATAATATCTTAAACGAGCCTGACTTCTGGAAAGAACCTGTAAATGCTGTCAAGCAAGCGTATAGTATAACCGATTCTAGTATTTTAGAGAAGTCAGGTGAATTGGGTAGAGGGGGTTCAACCGCAGTTACTGCAATATTGATTGATGGTCAGAAGTTAATAGTAGCCAATATTGGAGATTCTCGGGCTGTCTTATCAAAGAAAGGTGTGGCCAAACAACTGTCGGTGGATCATGAACCAACCACAGAACATGAGGATATAAAAAATAGAGGTGGTTTTGTATCAAGATTCCCAGGGGACGTTCCGCGAGTTGATGGACGGTTAGCGGTGTCGAGGGCTTTTGGTGACAAAAGCTTGAAGAAACACTTGAGTTCAGAGCCACATGTGACAGTGGAGAAAATAAATGATGATGCAGAGTTTATTATATTAGCCAGTGATGGATTGTGGAAGGTAATGTCGAATCAAGAAGCAGTAGATTGTATTAAAGATATAAAGGATGCTCGATCTTCAGCAAAGCGTCTCACCGAAGAAGCAGTTAACAGGAAAAGCAATGACGATATTTCTTGCATTGTTGTGAAACTTCAGTGA 852 0.3991 MAARDILHKMKEKVGFGLSDPDSGKGKSKMSKHITHGFHLVKGRSYHEMEDYLVARFKQIDNHELGLFAIFDGHAGHNVPNYLQSHLFDNILNEPDFWKEPVNAVKQAYSITDSSILEKSGELGRGGSTAVTAILIDGQKLIVANIGDSRAVLSKKGVAKQLSVDHEPTTEHEDIKNRGGFVSRFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPHVTVEKINDDAEFIILASDGLWKVMSNQEAVDCIKDIKDARSSAKRLTEEAVNRKSNDDISCIVVKLQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03251 283 FunFam Probable protein phosphatase 2C 39 25 283 - -
Trre11g03251 283 PANTHER PROTEIN PHOSPHATASE 30 281 IPR015655 GO:0004722|GO:0006470
Trre11g03251 283 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Trre11g03251 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
Trre11g03251 283 SUPERFAMILY PP2C-like 31 282 IPR036457 -
Trre11g03251 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Trre11g03251 283 CDD PP2Cc 42 282 IPR001932 -
Trre11g03251 283 SMART PP2C_4 33 280 IPR001932 -
Trre11g03251 283 Gene3D - 30 283 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03251 Trre-Chr11 44233488 44236248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03251 1 283 PP2C-type Phosphatase Gene Family AT3G15260 71.972 2.25e-154 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03251 K17506 - gmx:100500617 496.508