Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03250 ATGGTGGGCTCAGGAGCAGCATCAGATAGGAGCAAAGAAGCTGTTGGTATGATGGCCCTTCATGAGGCCCTCAGAACCGTCTGTCTTAACTCAGACTGGACTTACTCTGTCTTCTGGACTATTCGTCCTCGCCCAAGAGTTAGAGGTGGTAATGGCTGCAAGGTTGGAGATGATAATGGCAGCTTGATGTTGATGTGGGAAGATGGATTTTGCCGTGGAAGAGATTGTGTTGGAGATCATATTGATGGTGGTGGAGGTGGAGAAGATCCTGTTAGAAAATCTTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAATGTCACAAGTGGGTCTTTAAAGAGCCAACAGAATGTGAACCAAATATCTCTAACTACTGGCAAAGTTCCTTTGATGCTCTTCCACCTGAATGGACAGACCAATTTGAGTCAGGCATTCAGACCATAGCTGTAATTCAAGCTGGACATGGTCTTCTTCAACTTGGTTCTTGTAAGATTATTCCTGAAGATCTTCATTTTGTCCTAAGAATGAGACACACATTTGAATCATTAGGATACCAATCTGGTTTCTACCTCTCACAACTCTTCTCATCAACAAGGAACACTTCATCATCAACTTCACTTCCTTCAAAACCATCTTCAACAATTCCAATTAGGCCACCTCCACCAATCTTCAACTGGAGTCAAAGACCACTAACTTCTCCTTCATCAATGCTATCCTCACCCAATTTTCAACAACATGCAGCTAGACTTGGTTTTCCACAAACCAAAGATGAAACACACATGTTCCTAATGCCTCATGCATCATCACATGAAACTCCTAGAATGGAAGACATGATGGGAGGAGGAGGAGGAGGCGGCGGAGAACATCATGAAAATGACATTAAATGGCCAAATGGTTTGTCTTTCTTTAATGCTTTAACTGGTAGAGCCGATGATGCTAAGCTTTTGTTTAATCCAGATGGTTTAGGTGGAAAGCAAGGTGATCATGATCATGATCATGGTCATGATCATAATCAACAACATCATCATACTCTTAATCAAAATCCTAATTCAGATGTTTCAAACCCAAATGAGTTCTTGAGCTTAGATAGTCACCATGAAGGTGCAAGGAAAATGGACAAGTTTAAGAGAAGTTTCACTTTACCTACAAGAGTTGCTTCATCATCTTCATCTACTTCAATAATGGATCATCATCAACAACAAGGTGTGGAGTATAGGAATTCAGAAGGTGGTAGCATGTACTCAGATGTTATGGAGACATTTTTGGAGTGA 1305 0.41 MVGSGAASDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRDCVGDHIDGGGGGEDPVRKSFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSSTIPIRPPPPIFNWSQRPLTSPSSMLSSPNFQQHAARLGFPQTKDETHMFLMPHASSHETPRMEDMMGGGGGGGGEHHENDIKWPNGLSFFNALTGRADDAKLLFNPDGLGGKQGDHDHDHGHDHNQQHHHTLNQNPNSDVSNPNEFLSLDSHHEGARKMDKFKRSFTLPTRVASSSSSTSIMDHHQQQGVEYRNSEGGSMYSDVMETFLE 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03250 434 MobiDBLite consensus disorder prediction 328 372 - -
Trre11g03250 434 PANTHER GB|AAF34833.1 1 434 IPR044170 -
Trre11g03250 434 MobiDBLite consensus disorder prediction 398 422 - -
Trre11g03250 434 MobiDBLite consensus disorder prediction 212 231 - -
Trre11g03250 434 MobiDBLite consensus disorder prediction 354 372 - -
Trre11g03250 434 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 191 IPR025610 -
Trre11g03250 434 MobiDBLite consensus disorder prediction 398 419 - -
Trre11g03250 434 MobiDBLite consensus disorder prediction 335 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03250 Trre-Chr11 44194101 44199736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03250 21 223 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.373 6.43e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03250 - - psat:127086298 679.478