Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03244 ATGGAGGATCTAGCTGGTCTAGTCGAGGCAACTGGATCGAGATTTACTTCGTTGGAGCTTATTGGGCAGGGATCATTTGGCGATGTATATAAAGGGTTTGACAAGGAGCTCAACAAAGAAGTTGCCATCAAAGTGATTGATTTGGAAGAGTCAGAGGATGACATTGACGATATTCAGAAGGAAATTTCTGTTCTGTCACAATGCCGTTGTCCATACATTACCGAGTATTATGGTTCTTTTCTCAATCAGACTAAACTATGGATAATAATGGAGTATATGGCTGGCGGCTCTGTTGCTGATCTACTCCAATCAGGTCCTCCCCTAGATGAAATGTCAATTGCTTATATTCTTCGTGATTTGTTGCATGCTGTTGATTACCTACATAGTGAAGGCAAAATCCATAGAGACATTAAAGCTGCAAACATTTTATTGTCCGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTCTCTGCACAATTGACAAGGACTATATCAAGGAGAAAGACATTTGTAGGCACACCATTCTGGATGGCGCCTGAGGTTATTCAGAACTCAGATGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACTGCAATTGAGATGGCAAAGGGGGAGCCTCCACTTGCTGATCTTCATCCCATGAGGGTGCTTTTCATCATACCCCGAGAAAATCCTCCACAGCTAGATGAGCATTTTTCTCGACCCATGAAAGAATTTGTTTCATCATGTTTGAAGAAGGTTCCGGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAAGACCGTTTTATTCGCAATGCTAGGAAGAGTCCAAAGCTTTTGGAAAGATTAAGGGAGCGTCCAAAATATCAAGTTAAGGAAGACCTGGAGACAGCTAGAAATGGCCAAAGAGGGATTGGTGAGGGATCAGACACTATGAAGGTTGCAAGAGATTCTAAAGTTGATGAAATCAATCGATCCAGTCAGGGCAAGACCCCGAAAAGTTCTGAATGGGACTTTAGCATTGGTGAATCAGAGGGTACTGGAACCTTTCGAAGTGTTTCACGGCCACCACAGTCTAGAGATAAGAAAACTGAAGGTTCATATAATCAGCTTACCCAAAGAAAAGCTCTAGACACTGGCTATCAAGGAGGATTTCCCAATAGAAGTTCATTCAATCAATCACTTGAAAAAGATCTTAGAGCTCCTTACCTTCACGAGCAGCTGGATAATCAGCTTGAAGATGATGAGTTATCTGGGAATGGATCAGGAACCGTTGTTATACGCTCTCCCAAAGGAATATCAAGGACATCTGCGTTTCGTGAGCATATCTCCCAGTCCCAGGATGAATTATCTGAGAATGGATCAGGAACTGTTGTTATTCGATCTCCGAAAGGATCAAAGCCATCTGTGTTTCGTGAGAGCTCCCAGTCCAGCAGCAGCTATGCTTCTTTTGAAGATACTTCCACAAGTGGAACTGTTGTTTTACGTAGTCAACAAGATGATTCTGATTCTCCACAGACTCCAAGGTCCCGGCTAGGACTTTATGACAGAAATTCAAATGTTTCACTTGAAGATAGTGCTGCAAACCTAGCCGAGGCAAAGGCTGCTATCCAAGGAGGGCAACGAAAAGTGAATACTCGGGAAAGGCATTCCCGGGGAAAAATCAATAGTGATAATATACAGGAAAGCAAACGAGACCAAATGACTAGCAGCACTGATTCTTCCAGATCATATCGTGAATACATTGATGCACAAAGGGGTATGGTACGATCAAATTACGCCGGTGATGAGGAAGAAAGTGCTAGAATAATATCATCCTCGGCGCCATTATCAGTTTTGCTTATTCCTTCATCAAAAGAGGCTATTGCTGATGATCCAGAAGGGCAAATCGTGCGGGCAGTTATCAATTCATTAATAAACATGGAGGGTACAAAGCCTAGATCCTCTGATGTTTTTGTCAAAAAATTGCTTCAAAGATTAGCAAGTTCAAAGGAAGATTCATTGAAGGACCTGCAAGGACTGGCAAGCCAATTATTCAGCAAAGCCAAGTCAACCGAAGAAATTCAAAATGCGGAAGCTGATAACCGAAGGAAACAACATAACAAGGAACCTCATCCAAATAGCAACTTAAGCCCTCTTGCAAGATTTCTTCTATCAAGATGGCAAGGCCAAACTTCACGGGATCTAAACCAATCTTGA 2190 0.4247 MEDLAGLVEATGSRFTSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEESEDDIDDIQKEISVLSQCRCPYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIAYILRDLLHAVDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKEFVSSCLKKVPAERPSAKELLKDRFIRNARKSPKLLERLRERPKYQVKEDLETARNGQRGIGEGSDTMKVARDSKVDEINRSSQGKTPKSSEWDFSIGESEGTGTFRSVSRPPQSRDKKTEGSYNQLTQRKALDTGYQGGFPNRSSFNQSLEKDLRAPYLHEQLDNQLEDDELSGNGSGTVVIRSPKGISRTSAFREHISQSQDELSENGSGTVVIRSPKGSKPSVFRESSQSSSSYASFEDTSTSGTVVLRSQQDDSDSPQTPRSRLGLYDRNSNVSLEDSAANLAEAKAAIQGGQRKVNTRERHSRGKINSDNIQESKRDQMTSSTDSSRSYREYIDAQRGMVRSNYAGDEEESARIISSSAPLSVLLIPSSKEAIADDPEGQIVRAVINSLINMEGTKPRSSDVFVKKLLQRLASSKEDSLKDLQGLASQLFSKAKSTEEIQNAEADNRRKQHNKEPHPNSNLSPLARFLLSRWQGQTSRDLNQS 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03244 729 MobiDBLite consensus disorder prediction 360 389 - -
Trre11g03244 729 Gene3D Transferase(Phosphotransferase) domain 1 12 300 - -
Trre11g03244 729 Coils Coil 48 68 - -
Trre11g03244 729 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g03244 729 MobiDBLite consensus disorder prediction 540 558 - -
Trre11g03244 729 MobiDBLite consensus disorder prediction 288 389 - -
Trre11g03244 729 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Trre11g03244 729 MobiDBLite consensus disorder prediction 307 323 - -
Trre11g03244 729 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g03244 729 Coils Coil 678 700 - -
Trre11g03244 729 MobiDBLite consensus disorder prediction 438 515 - -
Trre11g03244 729 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
Trre11g03244 729 CDD STKc_MST3_like 13 285 - -
Trre11g03244 729 MobiDBLite consensus disorder prediction 324 352 - -
Trre11g03244 729 SUPERFAMILY Protein kinase-like (PK-like) 13 293 IPR011009 -
Trre11g03244 729 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 11 678 - -
Trre11g03244 729 MobiDBLite consensus disorder prediction 678 712 - -
Trre11g03244 729 MobiDBLite consensus disorder prediction 534 574 - -
Trre11g03244 729 MobiDBLite consensus disorder prediction 684 701 - -
Trre11g03244 729 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g03244 729 MobiDBLite consensus disorder prediction 559 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03244 Trre-Chr11 44093372 44104860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03244 1 726 MAP Kinase Kinase Kinase Kinase AT3G15220 60.768 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Trre11g03244 Pkinase 8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03244 K08838 - gmx:100815042 1074.31