Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03242 ATGTCACTGGGTCTACCAGTGGCGGCGACGGTGAAAGGTATCGGATGGAAGATTGAAAGGTATCAAGGGAAGATTGAACCGTTTGCTTGTGTTGGTGAAGATAATGCTGGAGTCAATGTTAATCCCAAAGGAGAAATGAAAGGTTCTGCTATTACTGGTCCAATTGGGAAGGAGTGTGCTGATCTATGGCCTAGGAGTATTCATAAGGATTTTTGGTTCTGCTGTTTGATGTTGTATCTAGGTTTTGCTTTAGGTTGA 258 0.4302 MSLGLPVAATVKGIGWKIERYQGKIEPFACVGEDNAGVNVNPKGEMKGSAITGPIGKECADLWPRSIHKDFWFCCLMLYLGFALG 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03242 85 Gene3D Ribosomal protein L14 18 68 IPR036853 GO:0003735|GO:0005840|GO:0006412
Trre11g03242 85 SUPERFAMILY Ribosomal protein L14 30 66 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03242 Trre-Chr11 44066900 44067157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03242 1 65 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 42.975 6.18e-18 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03242 K02894 - cave:132171032 72.7886