Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03178 ATGGTGATGATGAAACTTGTTTTGGTTGTTGTTACTGTTACTACATTTTTGGTGAATGTGTCATTTGCCTTATACACACCTCATGATAATTACTTAATTGCTTGTGGTTCATCAAAAAGTATAAACTTTCAAGATCGAGTTTTCGTTCCGGATTCACAGCATTCATCACTTGTGTTGAAAACTGGAAATTCAATTGTTGTTGCTAGTTCTAATTCAAGTGTCGTTCCATCTCCAATTTATCAATCTGCTAGGATTTTCAGTGAGAAAGGTTCTTATAGATTTGATGTTCAACAAGGTAGGCATTGGATTAGGTTATATTTTTATCCTCTTCCAAACACTAGCCATAATTTGACTTCAGCTTCTATAACAGTTGTTAGTGATGATTTTGTTTTATTAAGCAACTTCACTTTTAGAAACTATAGTGGTTCTTATATGTTTAGGGAGTATGCTGTCAATGTGACCTCTGATTCTTTGACTGTAACCTTTATTCCTTCGAATGGTTCGGTTGCTTTTGTGAATGCAATTGAAGTTGTGTCGATGCCAGATGACTTGTTTGTCGATCAGGCATTGTCGCTTAGTCCATTAGCCCCTTTTAGTGGCCTTTCGGAACTTGCTTTTGAAACCGTTTACCGATTGAACATAGGAGGAACCTTGCTCACTGCGGAAAATGATACATTGGGAAGGACTTGGGAGAATGATCAGAAGTATCTCCATGTGAACAGCTCGGTTACTAATGTGTCTGCTAGTCCTTCAAGCATTAGGTATCGACCGGGCGTTACCGCTGAGACGGCACCTAATTGGGTTTATGCCACTGCTGAAGCAATGGGGGATGCAAATGTTGCCAATTCAAATTTCAACATTACTTGGGTCTTTGATGTGGATCCCAGTTTCTCCTATTTTGTTCGGCTTCACTTTTGCGATATTATGAGCAAGGCAATGAATACGTTAGTTTTCAATGTATTCATAAATACTGATATAGCTATTGGAAGCCTTGACCTATCATCGATGACTAATGATTTGGCTGTGCCTTACTTTAAGGATTTTGTTTCCAATGCCTCATCGGATAACACTTTGACGGTAAGCGTTGGTCCTGATACAATGGCAGACATTACAAATGCAACTATGAGTGGATTGGAGATAATGAAAATCAGCAATGCATTGAAGAGCTTGGATGGACTTTCTTCGGTCAAGAGTCTTCTTCCTGGTTCAAAATCAAACATGAACAAGGTAGGAATCATCGTTGGTTCCGCCGCTGGTGCTTTAGTTGCCTTGGCTTTTGTTGGTTTGTGTGTTTTCTTGTTGGCGAGAAGAAATTCGAAATCTCCTCAAGAGGGTGGTCATTCATGGCTGCCATTGCCCTTGTACGGAAATTCTCAAACCATGACAAAAATGTCAACAACCTCACAGAAGAGTGGAGGAACTGCAAGCTTCATTTCTTCGACGAATCTTGGACGGTTCTTCACTTTCCAAGAAATCCTAGACGCAACCAACAAATTTGATGAGAAGCTTCTTCTTGGTGTTGGTGGTTTCGGCAGGGTTTATAGGGGAATCCTTGATGATGGTACCACTGTAGCTGTTAAAAGGGGAAATCCAAGATCTGAACAAGGTCTTGCTGAATTTCGAACGGAAATTGAAATGTTATCGAAGCTTCGCCATCGTCATCTTGTGTCTCTAATTGGTTATTGTGATGAAAGGTCAGAAATGATTCTTGTCTATGAATATATGGCTAATGGTCCCCTCAGGAGTCATTTGTATGGAACTGATCTACCACCTCTATCATGGAAACAACGGCTCGATATTTGCATCGGAGCAGCAAGAGGACTTCATTATCTCCACACCGGTGCATCGCAAAGCATAATTCATCGAGACGTAAAGACAACAAACATCCTTTTAGATGATAGCTTTGTTGCTAAAGTTGCTGACTTTGGCCTCTCCAAAACCGGTCCTGCACTCGATCAGACTCACGTGAGCACGGCTGTTAAAGGTAGTTTCGGTTATCTTGATCCAGAATACTTTAGAAGGCAACAACTAACAGAGAAATCAGATGTTTATTCATTCGGAGTAGTTTTAATGGAAGTGCTATGCACAAGACCGGCTTTGAATCCTGTCCTTCCTAGGGAACAGGTTAATATAGCCGAGTGGGCGATGAATTGGCAGAAGAAGGGAATGCTTGATCAAATCATGGATCCTCAACTTGTCGGGAAGGTCAATCCTGCTTCGCTCAAGAAGTTCGGGGAGACAGCAGAGAAGTGTTTGGCTGAGTATGGAGTGGATAGGCCACCTATGGGAGATGTTTTATGGAACCTTGAATATGCTTTGCAGCTCCAAGAAACCTCATCAGCACTCATGGAACCAGAAGATAACAGTACGAATCACATTACCGGAATTCAGTTGACACGTCTTGAGAATTTTGATAACAGTGTGAGTATGGTTGATGGAAGCAACTCTGTCACGGACGAAGATGCAGAAGACGCTGCTACAAGTGCAGTGTTCTCGCAATTGGTAAATCCACGTGGAAGATGA 2523 0.4138 MVMMKLVLVVVTVTTFLVNVSFALYTPHDNYLIACGSSKSINFQDRVFVPDSQHSSLVLKTGNSIVVASSNSSVVPSPIYQSARIFSEKGSYRFDVQQGRHWIRLYFYPLPNTSHNLTSASITVVSDDFVLLSNFTFRNYSGSYMFREYAVNVTSDSLTVTFIPSNGSVAFVNAIEVVSMPDDLFVDQALSLSPLAPFSGLSELAFETVYRLNIGGTLLTAENDTLGRTWENDQKYLHVNSSVTNVSASPSSIRYRPGVTAETAPNWVYATAEAMGDANVANSNFNITWVFDVDPSFSYFVRLHFCDIMSKAMNTLVFNVFINTDIAIGSLDLSSMTNDLAVPYFKDFVSNASSDNTLTVSVGPDTMADITNATMSGLEIMKISNALKSLDGLSSVKSLLPGSKSNMNKVGIIVGSAAGALVALAFVGLCVFLLARRNSKSPQEGGHSWLPLPLYGNSQTMTKMSTTSQKSGGTASFISSTNLGRFFTFQEILDATNKFDEKLLLGVGGFGRVYRGILDDGTTVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLDICIGAARGLHYLHTGASQSIIHRDVKTTNILLDDSFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMNWQKKGMLDQIMDPQLVGKVNPASLKKFGETAEKCLAEYGVDRPPMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTRLENFDNSVSMVDGSNSVTDEDAEDAATSAVFSQLVNPRGR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03178 840 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Trre11g03178 840 SMART serkin_6 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g03178 840 PANTHER OS07G0166700 PROTEIN 485 776 IPR045272 GO:0004714|GO:0006468
Trre11g03178 840 Pfam Protein tyrosine and serine/threonine kinase 504 696 IPR001245 GO:0004672|GO:0006468
Trre11g03178 840 FunFam Receptor-like protein kinase FERONIA 205 385 - -
Trre11g03178 840 CDD STKc_IRAK 505 770 - -
Trre11g03178 840 Gene3D Transferase(Phosphotransferase) domain 1 575 794 - -
Trre11g03178 840 SUPERFAMILY Protein kinase-like (PK-like) 476 770 IPR011009 -
Trre11g03178 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Trre11g03178 840 FunFam receptor-like protein kinase FERONIA 460 574 - -
Trre11g03178 840 Gene3D - 204 385 - -
Trre11g03178 840 Gene3D - 30 181 - -
Trre11g03178 840 Gene3D Phosphorylase Kinase; domain 1 457 574 - -
Trre11g03178 840 FunFam Putative receptor-like protein kinase 30 181 - -
Trre11g03178 840 ProSiteProfiles Protein kinase domain profile. 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g03178 840 FunFam Receptor-like protein kinase FERONIA 575 791 - -
Trre11g03178 840 Pfam Malectin-like domain 33 383 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03178 Trre-Chr11 43129729 43132251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03178 23 790 Receptor kinase-like Gene Family AT2G21480 53.768 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trre11g03178 Malectin_like 9.7e-42 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03178 - - gmx:100809700 1326.23